Aliases : evm_27.TU.AmTr_v1.0_scaffold00098.52
Description : Pentatricopeptide repeat-containing protein At5g50390, chloroplastic OS=Arabidopsis thaliana
Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000789 (LandPlants) Phylogenetic Tree(s): OG_05_0000789_tree ,
OG_06_0000692 (SeedPlants) Phylogenetic Tree(s): OG_06_0000692_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00098p00167700 | |
Cluster | HCCA: Cluster_118 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G65570 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Archaeplastida | |
GSVIVT01012461001 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | Archaeplastida | |
Gb_06370 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | Archaeplastida | |
LOC_Os05g38190.2 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.02 | Archaeplastida | |
MA_230261g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | Archaeplastida | |
Smo118230 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.03 | Archaeplastida | |
Smo134463 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.04 | Archaeplastida | |
Smo82058 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | Archaeplastida | |
Smo92610 | No alias | Pentatricopeptide repeat-containing protein At5g56310... | 0.03 | Archaeplastida | |
Solyc01g081290.4.1 | No alias | protein kinase (PEPRK) | 0.05 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Neighborhood |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Neighborhood |
MF | GO:0004813 | alanine-tRNA ligase activity | IEP | Neighborhood |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Neighborhood |
MF | GO:0005215 | transporter activity | IEP | Neighborhood |
CC | GO:0005575 | cellular_component | IEP | Neighborhood |
CC | GO:0005622 | intracellular | IEP | Neighborhood |
CC | GO:0005643 | nuclear pore | IEP | Neighborhood |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Neighborhood |
BP | GO:0006419 | alanyl-tRNA aminoacylation | IEP | Neighborhood |
MF | GO:0008565 | protein transporter activity | IEP | Neighborhood |
MF | GO:0015095 | magnesium ion transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0015693 | magnesium ion transport | IEP | Neighborhood |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Neighborhood |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Neighborhood |
MF | GO:0034061 | DNA polymerase activity | IEP | Neighborhood |
BP | GO:0043038 | amino acid activation | IEP | Neighborhood |
BP | GO:0043039 | tRNA aminoacylation | IEP | Neighborhood |
CC | GO:0044464 | cell part | IEP | Neighborhood |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0070838 | divalent metal ion transport | IEP | Neighborhood |
BP | GO:0072511 | divalent inorganic cation transport | IEP | Neighborhood |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Neighborhood |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Neighborhood |
No external refs found! |