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  5. AMTR_s00099p00012720

AMTR_s00099p00012720 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00099.1

Description : Cell wall.hemicellulose.xylan.modification and degradation.glucuronoxylan 4-O-methyltransferase


Gene families : OG0000727 (Archaeplastida) Phylogenetic Tree(s): OG0000727_tree ,
OG_05_0000525 (LandPlants) Phylogenetic Tree(s): OG_05_0000525_tree ,
OG_06_0001137 (SeedPlants) Phylogenetic Tree(s): OG_06_0001137_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00099p00012720
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AT1G09610 No alias Protein of unknown function (DUF579) 0.07 Archaeplastida
AT1G33800 No alias Protein of unknown function (DUF579) 0.05 Archaeplastida
AT3G50220 No alias Protein of unknown function (DUF579) 0.06 Archaeplastida
AT5G67210 No alias Protein of unknown function (DUF579) 0.08 Archaeplastida
GSVIVT01004862001 No alias Cell wall.hemicellulose.xylan.modification and... 0.07 Archaeplastida
GSVIVT01023202001 No alias No description available 0.09 Archaeplastida
GSVIVT01023221001 No alias Glucuronoxylan 4-O-methyltransferase 3 OS=Arabidopsis thaliana 0.09 Archaeplastida
Gb_12265 No alias glucuronoxylan 4-O-methyltransferase 0.05 Archaeplastida
Gb_31046 No alias glucuronoxylan 4-O-methyltransferase 0.04 Archaeplastida
Gb_35413 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g06380.1 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.08 Archaeplastida
LOC_Os04g55640.1 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os06g47310.1 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os11g13870.1 No alias Glucuronoxylan 4-O-methyltransferase 2 OS=Arabidopsis... 0.05 Archaeplastida
MA_10430239g0010 No alias glucuronoxylan 4-O-methyltransferase 0.05 Archaeplastida
MA_19210g0010 No alias glucuronoxylan 4-O-methyltransferase 0.02 Archaeplastida
MA_195978g0010 No alias Probable methyltransferase At1g27930 OS=Arabidopsis... 0.02 Archaeplastida
MA_58340g0010 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.04 Archaeplastida
Pp3c16_5380V3.1 No alias Protein of unknown function (DUF579) 0.02 Archaeplastida
Smo57632 No alias Glucuronoxylan 4-O-methyltransferase 1 OS=Arabidopsis thaliana 0.05 Archaeplastida
Solyc01g103360.4.1 No alias glucuronoxylan 4-O-methyltransferase 0.09 Archaeplastida
Solyc02g064945.1.1 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.09 Archaeplastida
Solyc02g093090.1.1 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.14 Archaeplastida
Solyc03g110890.1.1 No alias Probable methyltransferase At1g27930 OS=Arabidopsis... 0.06 Archaeplastida
Solyc05g015497.1.1 No alias Probable methyltransferase At1g27930 OS=Arabidopsis... 0.06 Archaeplastida
Solyc11g031950.1.1 No alias glucuronoxylan 4-O-methyltransferase 0.07 Archaeplastida
Zm00001e006478_P001 No alias Probable methyltransferase At1g27930 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e011047_P001 No alias Glucuronoxylan 4-O-methyltransferase 2 OS=Arabidopsis... 0.11 Archaeplastida
Zm00001e013688_P001 No alias Protein IRX15-LIKE OS=Arabidopsis thaliana... 0.1 Archaeplastida
Zm00001e039770_P002 No alias glucuronoxylan 4-O-methyltransferase 0.1 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR021148 Polysacc_synth_dom 112 296
No external refs found!