AMTR_s00099p00039760 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00099.26

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.DREB-type transcription factor

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000070 (SeedPlants) Phylogenetic Tree(s): OG_06_0000070_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00099p00039760
Cluster	HCCA: Cluster_241

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00133970	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00016p00238800	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00111p00051610	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AT1G12610	DDF1	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT1G71520	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT3G14230	RAP2.2	related to AP2 2	0.03	Archaeplastida
AT4G17500	ERF-1, ATERF-1	ethylene responsive element binding factor 1	0.04	Archaeplastida
AT4G18450	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G39780	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G07310	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G50080	ERF110	ethylene response factor 110	0.02	Archaeplastida
AT5G61890	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
Cre16.g649433	No alias	No description available	0.02	Archaeplastida
GSVIVT01013914001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
GSVIVT01013917001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01013923001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01013929001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01019519001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01025461001	No alias	External stimuli response.biotic...	0.04	Archaeplastida
GSVIVT01035852001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
Gb_01212	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01215	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_07474	No alias	transcription factor (ERF)	0.06	Archaeplastida
Gb_07476	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_08541	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_11794	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_26662	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_26667	No alias	transcription factor (ERF)	0.04	Archaeplastida
Gb_32995	No alias	Ethylene-responsive transcription factor ERF016...	0.03	Archaeplastida
LOC_Os01g58420.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os02g43820.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os03g64260.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os04g46250.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os04g52090.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os05g34730.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os06g11860.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os06g11940.1	No alias	Ethylene-responsive transcription factor ERF017...	0.04	Archaeplastida
LOC_Os09g11480.2	No alias	Ethylene-responsive transcription factor ERF112...	0.04	Archaeplastida
LOC_Os11g06770.2	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_10426586g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_10432141g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_135279g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_164803g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_18454g0020	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_27309g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_40338g0010	No alias	Ethylene-responsive transcription factor ERF012...	0.03	Archaeplastida
MA_83118g0010	No alias	transcription factor (DREB)	0.05	Archaeplastida
MA_9304g0020	No alias	transcription factor (ERF)	0.02	Archaeplastida
Pp3c11_23290V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c1_27710V3.1	No alias	cytokinin response factor 2	0.02	Archaeplastida
Pp3c1_5010V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c25_1760V3.1	No alias	related to AP2 11	0.02	Archaeplastida
Pp3c27_6030V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c4_2530V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c6_16660V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Solyc03g026270.3.1	No alias	transcription factor (DREB). transcription factor (CBF/DREB1)	0.03	Archaeplastida
Solyc03g026280.3.1	No alias	transcription factor (DREB). transcription factor (CBF/DREB1)	0.04	Archaeplastida
Solyc03g093540.1.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc03g093550.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc03g124110.2.1	No alias	transcription factor (DREB). transcription factor (CBF/DREB1)	0.04	Archaeplastida
Solyc05g052040.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc06g035700.1.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Solyc08g078170.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc10g006130.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e000611_P001	No alias	Ethylene-responsive transcription factor ERF073...	0.03	Archaeplastida
Zm00001e003800_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e007205_P001	No alias	Dehydration-responsive element-binding protein 1E...	0.04	Archaeplastida
Zm00001e009947_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e015430_P001	No alias	Dehydration-responsive element-binding protein 1G...	0.04	Archaeplastida
Zm00001e022864_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e023748_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e025840_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e027351_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e030279_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e033965_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e034661_P001	No alias	Ethylene-responsive transcription factor ERF115...	0.02	Archaeplastida
Zm00001e035334_P001	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Zm00001e037869_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e040033_P001	No alias	No annotation	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEP	Neighborhood
MF	GO:0004143	diacylglycerol kinase activity	IEP	Neighborhood
MF	GO:0004252	serine-type endopeptidase activity	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
BP	GO:0006072	glycerol-3-phosphate metabolic process	IEP	Neighborhood
BP	GO:0006576	cellular biogenic amine metabolic process	IEP	Neighborhood
BP	GO:0006595	polyamine metabolic process	IEP	Neighborhood
BP	GO:0006596	polyamine biosynthetic process	IEP	Neighborhood
BP	GO:0006597	spermine biosynthetic process	IEP	Neighborhood
BP	GO:0007186	G-protein coupled receptor signaling pathway	IEP	Neighborhood
BP	GO:0007205	protein kinase C-activating G-protein coupled receptor signaling pathway	IEP	Neighborhood
BP	GO:0008215	spermine metabolic process	IEP	Neighborhood
BP	GO:0008216	spermidine metabolic process	IEP	Neighborhood
MF	GO:0008236	serine-type peptidase activity	IEP	Neighborhood
BP	GO:0008295	spermidine biosynthetic process	IEP	Neighborhood
BP	GO:0009308	amine metabolic process	IEP	Neighborhood
BP	GO:0009309	amine biosynthetic process	IEP	Neighborhood
CC	GO:0009507	chloroplast	IEP	Neighborhood
CC	GO:0009536	plastid	IEP	Neighborhood
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Neighborhood
MF	GO:0017171	serine hydrolase activity	IEP	Neighborhood
BP	GO:0042401	cellular biogenic amine biosynthetic process	IEP	Neighborhood
BP	GO:0044106	cellular amine metabolic process	IEP	Neighborhood
BP	GO:0046168	glycerol-3-phosphate catabolic process	IEP	Neighborhood
CC	GO:0048046	apoplast	IEP	Neighborhood
MF	GO:0051287	NAD binding	IEP	Neighborhood
BP	GO:0052646	alditol phosphate metabolic process	IEP	Neighborhood
BP	GO:0097164	ammonium ion metabolic process	IEP	Neighborhood
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	44	92

External Links

No external refs found!

AMTR_s00099p00039760 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation