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  5. AMTR_s00099p00070100

AMTR_s00099p00070100 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00099.49

Description : Cell wall.hemicellulose.heteromannan.modification and degradation.endo-beta-1,4-mannanase


Gene families : OG0000315 (Archaeplastida) Phylogenetic Tree(s): OG0000315_tree ,
OG_05_0000179 (LandPlants) Phylogenetic Tree(s): OG_05_0000179_tree ,
OG_06_0001045 (SeedPlants) Phylogenetic Tree(s): OG_06_0001045_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00099p00070100
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01018923001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
GSVIVT01037211001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
GSVIVT01037212001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.02 Archaeplastida
Gb_04673 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
Gb_18866 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
Gb_18867 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
Gb_23961 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
Gb_28909 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Gb_30579 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
LOC_Os01g47400.1 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
MA_38956g0010 No alias endo-beta-1,4-mannanase 0.06 Archaeplastida
Pp3c13_12000V3.1 No alias Glycosyl hydrolase superfamily protein 0.03 Archaeplastida
Smo101148 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
Smo234867 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
Solyc04g080620.3.1 No alias endo-beta-1,4-mannanase 0.03 Archaeplastida
Solyc10g074920.2.1 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
Zm00001e020240_P001 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 42 328
No external refs found!