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  5. AMTR_s00099p00124940

AMTR_s00099p00124940 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00099.108

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase guanine nucleotide exchange factor (RAB-GEF) activities.VPS9 RAB5 guanine nucleotide exchange factor


Gene families : OG0003843 (Archaeplastida) Phylogenetic Tree(s): OG0003843_tree ,
OG_05_0002937 (LandPlants) Phylogenetic Tree(s): OG_05_0002937_tree ,
OG_06_0003280 (SeedPlants) Phylogenetic Tree(s): OG_06_0003280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00099p00124940
Cluster HCCA: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00194p00047120 evm_27.TU.AmTr_v1... Vesicle trafficking.regulation of membrane tethering and... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001505 regulation of neurotransmitter levels IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004000 adenosine deaminase activity IEP Neighborhood
MF GO:0004372 glycine hydroxymethyltransferase activity IEP Neighborhood
BP GO:0006544 glycine metabolic process IEP Neighborhood
BP GO:0006563 L-serine metabolic process IEP Neighborhood
MF GO:0008381 mechanosensitive ion channel activity IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Neighborhood
MF GO:0019239 deaminase activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0030151 molybdenum ion binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
BP GO:0042133 neurotransmitter metabolic process IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
CC GO:0071203 WASH complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003123 VPS9 149 173
No external refs found!