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  5. AMTR_s00099p00142390

AMTR_s00099p00142390 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00099.129

No description available


Gene families : OG0001063 (Archaeplastida) Phylogenetic Tree(s): OG0001063_tree ,
OG_05_0001804 (LandPlants) Phylogenetic Tree(s): OG_05_0001804_tree ,
OG_06_0001344 (SeedPlants) Phylogenetic Tree(s): OG_06_0001344_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00099p00142390
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
Gb_08668 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g40700.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g54360.1 No alias TAC18 cofactor of plastid-encoded RNA polymerase 0.03 Archaeplastida
LOC_Os04g36760.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os10g32840.1 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_10432956g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_97010g0010 No alias no hits & (original description: none) 0.09 Archaeplastida
Zm00001e002513_P001 No alias TAC18 cofactor of plastid-encoded RNA polymerase 0.03 Archaeplastida
Zm00001e023001_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR008579 DUF861_Cupin_3 67 140
No external refs found!