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Aliases : evm_27.TU.AmTr_v1.0_scaffold00099.132
Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.zf-HD transcription factor
Gene families : OG0000209 (Archaeplastida) Phylogenetic Tree(s): OG0000209_tree ,
OG_05_0000122 (LandPlants) Phylogenetic Tree(s): OG_05_0000122_tree ,
OG_06_0000088 (SeedPlants) Phylogenetic Tree(s): OG_06_0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00099p00145100 | |
| Cluster | HCCA: Cluster_122 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00119p00074870 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.HB... | 0.04 | Archaeplastida | |
| AT1G14440 | AtHB31, ZHD4, HB31 | homeobox protein 31 | 0.06 | Archaeplastida | |
| AT1G14687 | AtHB32, HB32, ZHD14 | homeobox protein 32 | 0.03 | Archaeplastida | |
| AT1G75240 | AtHB33, ZHD5, HB33 | homeobox protein 33 | 0.06 | Archaeplastida | |
| AT2G02540 | ZHD3, HB21, ATHB21, ZFHD4 | homeobox protein 21 | 0.04 | Archaeplastida | |
| AT3G50890 | ZHD7, HB28, AtHB28 | homeobox protein 28 | 0.08 | Archaeplastida | |
| AT4G24660 | ATHB22, MEE68, ZHD2, HB22 | homeobox protein 22 | 0.02 | Archaeplastida | |
| AT5G15210 | ZHD8, ATHB30, ZFHD3, HB30 | homeobox protein 30 | 0.06 | Archaeplastida | |
| AT5G42780 | HB27, ZHD13, AtHB27 | homeobox protein 27 | 0.03 | Archaeplastida | |
| AT5G65410 | ZHD1, ZFHD2, HB25, ATHB25 | homeobox protein 25 | 0.03 | Archaeplastida | |
| GSVIVT01000250001 | No alias | RNA biosynthesis.transcriptional activation.HB... | 0.04 | Archaeplastida | |
| GSVIVT01009128001 | No alias | RNA biosynthesis.transcriptional activation.HB... | 0.04 | Archaeplastida | |
| GSVIVT01009721001 | No alias | RNA biosynthesis.transcriptional activation.HB... | 0.03 | Archaeplastida | |
| GSVIVT01023137001 | No alias | RNA biosynthesis.transcriptional activation.HB... | 0.03 | Archaeplastida | |
| Gb_18045 | No alias | transcription factor (zf-HD) | 0.04 | Archaeplastida | |
| LOC_Os02g47770.1 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| LOC_Os03g50920.1 | No alias | transcription factor (zf-HD) | 0.02 | Archaeplastida | |
| LOC_Os04g35500.1 | No alias | transcription factor (zf-HD) | 0.07 | Archaeplastida | |
| LOC_Os08g34010.1 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| LOC_Os08g37400.1 | No alias | transcription factor (zf-HD) | 0.07 | Archaeplastida | |
| LOC_Os09g29130.1 | No alias | transcription factor (zf-HD) | 0.06 | Archaeplastida | |
| LOC_Os11g13930.1 | No alias | transcription factor (zf-HD) | 0.06 | Archaeplastida | |
| LOC_Os12g10630.1 | No alias | transcription factor (zf-HD) | 0.02 | Archaeplastida | |
| MA_19630g0020 | No alias | transcription factor (zf-HD) | 0.04 | Archaeplastida | |
| MA_19630g0030 | No alias | transcription factor (zf-HD) | 0.08 | Archaeplastida | |
| MA_38970g0010 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| MA_461761g0010 | No alias | transcription factor (zf-HD) | 0.05 | Archaeplastida | |
| Mp8g08190.1 | No alias | transcription factor (zf-HD) | 0.02 | Archaeplastida | |
| Pp3c19_20410V3.1 | No alias | homeobox protein 21 | 0.03 | Archaeplastida | |
| Pp3c1_15290V3.1 | No alias | homeobox protein 33 | 0.05 | Archaeplastida | |
| Pp3c2_21160V3.1 | No alias | homeobox protein 33 | 0.03 | Archaeplastida | |
| Solyc01g102980.3.1 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| Solyc02g067320.3.1 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| Solyc02g085160.1.1 | No alias | transcription factor (zf-HD) | 0.04 | Archaeplastida | |
| Solyc03g116070.1.1 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| Solyc04g014260.2.1 | No alias | transcription factor (zf-HD) | 0.06 | Archaeplastida | |
| Solyc04g074990.3.1 | No alias | transcription factor (zf-HD) | 0.05 | Archaeplastida | |
| Solyc04g080490.4.1 | No alias | transcription factor (zf-HD) | 0.05 | Archaeplastida | |
| Solyc05g007580.1.1 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| Zm00001e008082_P001 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| Zm00001e009830_P001 | No alias | transcription factor (zf-HD) | 0.05 | Archaeplastida | |
| Zm00001e015590_P001 | No alias | transcription factor (zf-HD) | 0.05 | Archaeplastida | |
| Zm00001e018364_P001 | No alias | transcription factor (zf-HD) | 0.06 | Archaeplastida | |
| Zm00001e021292_P003 | No alias | transcription factor (zf-HD) | 0.05 | Archaeplastida | |
| Zm00001e022486_P001 | No alias | transcription factor (zf-HD) | 0.05 | Archaeplastida | |
| Zm00001e023331_P001 | No alias | transcription factor (zf-HD) | 0.04 | Archaeplastida | |
| Zm00001e034119_P001 | No alias | transcription factor (zf-HD) | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003725 | double-stranded RNA binding | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0004521 | endoribonuclease activity | IEP | Neighborhood |
| MF | GO:0004540 | ribonuclease activity | IEP | Neighborhood |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
| MF | GO:0004888 | transmembrane signaling receptor activity | IEP | Neighborhood |
| MF | GO:0004970 | ionotropic glutamate receptor activity | IEP | Neighborhood |
| MF | GO:0005230 | extracellular ligand-gated ion channel activity | IEP | Neighborhood |
| MF | GO:0005231 | excitatory extracellular ligand-gated ion channel activity | IEP | Neighborhood |
| MF | GO:0005234 | extracellularly glutamate-gated ion channel activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| CC | GO:0005634 | nucleus | IEP | Neighborhood |
| BP | GO:0006629 | lipid metabolic process | IEP | Neighborhood |
| BP | GO:0006812 | cation transport | IEP | Neighborhood |
| MF | GO:0008066 | glutamate receptor activity | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| MF | GO:0015276 | ligand-gated ion channel activity | IEP | Neighborhood |
| MF | GO:0016597 | amino acid binding | IEP | Neighborhood |
| MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Neighborhood |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
| MF | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters | IEP | Neighborhood |
| MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | Neighborhood |
| MF | GO:0022824 | transmitter-gated ion channel activity | IEP | Neighborhood |
| MF | GO:0022834 | ligand-gated channel activity | IEP | Neighborhood |
| MF | GO:0022835 | transmitter-gated channel activity | IEP | Neighborhood |
| MF | GO:0022836 | gated channel activity | IEP | Neighborhood |
| MF | GO:0022839 | ion gated channel activity | IEP | Neighborhood |
| BP | GO:0030001 | metal ion transport | IEP | Neighborhood |
| CC | GO:0030288 | outer membrane-bounded periplasmic space | IEP | Neighborhood |
| MF | GO:0030594 | neurotransmitter receptor activity | IEP | Neighborhood |
| MF | GO:0031406 | carboxylic acid binding | IEP | Neighborhood |
| MF | GO:0033897 | ribonuclease T2 activity | IEP | Neighborhood |
| MF | GO:0038023 | signaling receptor activity | IEP | Neighborhood |
| CC | GO:0042597 | periplasmic space | IEP | Neighborhood |
| MF | GO:0043177 | organic acid binding | IEP | Neighborhood |
| CC | GO:0043226 | organelle | IEP | Neighborhood |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| MF | GO:0046983 | protein dimerization activity | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006456 | ZF_HD_homeobox_Cys/His_dimer | 58 | 113 |
| No external refs found! |