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  5. AMTR_s00099p00158360

AMTR_s00099p00158360 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00099.156

Description : E3 ubiquitin-protein ligase CHIP OS=Arabidopsis thaliana


Gene families : OG0002799 (Archaeplastida) Phylogenetic Tree(s): OG0002799_tree ,
OG_05_0002929 (LandPlants) Phylogenetic Tree(s): OG_05_0002929_tree ,
OG_06_0003278 (SeedPlants) Phylogenetic Tree(s): OG_06_0003278_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00099p00158360
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Zm00001e029182_P002 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015693 magnesium ion transport IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!