intracellular transportAMTR_s00101p00088850 details

AMTR_s00101p00088850 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00101.65

Description : Cytoskeleton.cytoskeleton-nucleoskeleton linking.SUN-WIP cytoskeleton-nucleoskeleton-linker complex.Cter-SUN inner nuclear envelope component


Gene families : OG0001769 (Archaeplastida) Phylogenetic Tree(s): OG0001769_tree ,
OG_05_0001562 (LandPlants) Phylogenetic Tree(s): OG_05_0001562_tree ,
OG_06_0001476 (SeedPlants) Phylogenetic Tree(s): OG_06_0001476_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00101p00088850
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
Pp3c11_22530V3.1 No alias SAD1/UNC-84 domain protein 1 0.02 Archaeplastida
Pp3c7_4170V3.1 No alias SAD1/UNC-84 domain protein 1 0.04 Archaeplastida
Smo64465 No alias Cytoskeleton.cytoskeleton-nucleoskeleton linking.SUN-WIP... 0.03 Archaeplastida
Zm00001e017295_P001 No alias inner nuclear envelope component Cter-SUN of SUN-WIP... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR012919 SUN_dom 318 452
No external refs found!