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Aliases : evm_27.TU.AmTr_v1.0_scaffold00101.98
Description : Tetraspanin-2 OS=Arabidopsis thaliana
Gene families : OG0000259 (Archaeplastida) Phylogenetic Tree(s): OG0000259_tree ,
OG_05_0000226 (LandPlants) Phylogenetic Tree(s): OG_05_0000226_tree ,
OG_06_0000242 (SeedPlants) Phylogenetic Tree(s): OG_06_0000242_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00101p00124120 | |
| Cluster | HCCA: Cluster_78 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Gb_00679 | No alias | Tetraspanin-8 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| LOC_Os05g03530.1 | No alias | Tetraspanin-6 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
| LOC_Os08g16050.1 | No alias | Tetraspanin-7 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| Zm00001e028243_P001 | No alias | Tetraspanin-6 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| Zm00001e029484_P001 | No alias | Tetraspanin-6 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| Zm00001e030929_P001 | No alias | Tetraspanin-8 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
| Zm00001e039133_P001 | No alias | Protein TORNADO 2 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016021 | integral component of membrane | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| CC | GO:0005634 | nucleus | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR018499 | Tetraspanin/Peripherin | 7 | 147 |
| No external refs found! |