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  5. AMTR_s00101p00149240

AMTR_s00101p00149240 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00101.123

Description : Solute transport.carrier-mediated transport.BART superfamily.AEC family.auxin efflux transporter (PIN-type)


Gene families : OG0000353 (Archaeplastida) Phylogenetic Tree(s): OG0000353_tree ,
OG_05_0000237 (LandPlants) Phylogenetic Tree(s): OG_05_0000237_tree ,
OG_06_0000465 (SeedPlants) Phylogenetic Tree(s): OG_06_0000465_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00101p00149240
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00241000 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.03 Archaeplastida
AMTR_s00019p00250330 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.06 Archaeplastida
AMTR_s00038p00079560 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.05 Archaeplastida
AT1G73590 ATPIN1, PIN1 Auxin efflux carrier family protein 0.03 Archaeplastida
AT1G77110 PIN6 Auxin efflux carrier family protein 0.03 Archaeplastida
AT2G01420 ATPIN4, PIN4 Auxin efflux carrier family protein 0.04 Archaeplastida
AT5G57090 EIR1, WAV6,... Auxin efflux carrier family protein 0.07 Archaeplastida
GSVIVT01008430001 No alias Solute transport.carrier-mediated transport.BART... 0.04 Archaeplastida
GSVIVT01011347001 No alias Solute transport.carrier-mediated transport.BART... 0.02 Archaeplastida
GSVIVT01011755001 No alias Solute transport.carrier-mediated transport.BART... 0.04 Archaeplastida
GSVIVT01011756001 No alias Solute transport.carrier-mediated transport.BART... 0.06 Archaeplastida
GSVIVT01025748001 No alias Solute transport.carrier-mediated transport.BART... 0.03 Archaeplastida
GSVIVT01031663001 No alias Solute transport.carrier-mediated transport.BART... 0.05 Archaeplastida
Gb_02144 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
Gb_06199 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
Gb_23207 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
Gb_37787 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
LOC_Os01g45550.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
LOC_Os01g51780.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
LOC_Os01g58860.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
LOC_Os01g69070.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
LOC_Os02g50960.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
LOC_Os05g50140.2 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
LOC_Os06g12610.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
LOC_Os11g02950.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
LOC_Os11g04190.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.06 Archaeplastida
LOC_Os12g04000.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
MA_18019g0030 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
MA_61553g0010 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
MA_69724g0010 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.06 Archaeplastida
Mp5g05150.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
Pp3c23_10200V3.1 No alias Auxin efflux carrier family protein 0.02 Archaeplastida
Pp3c24_2970V3.1 No alias Auxin efflux carrier family protein 0.04 Archaeplastida
Smo119024 No alias Solute transport.carrier-mediated transport.BART... 0.02 Archaeplastida
Solyc01g068410.4.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
Solyc03g118740.3.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
Solyc04g056620.2.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
Solyc05g008060.4.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
Solyc07g006900.2.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
Solyc10g078370.2.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
Zm00001e010118_P004 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
Zm00001e015800_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
Zm00001e020346_P002 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
Zm00001e024071_P002 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 Archaeplastida
Zm00001e036089_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.07 Archaeplastida
Zm00001e036414_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
Zm00001e037682_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.06 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004776 Mem_trans 9 559
No external refs found!