1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00102p00030630

AMTR_s00102p00030630 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00102.7

No description available


Gene families : OG0001319 (Archaeplastida) Phylogenetic Tree(s): OG0001319_tree ,
OG_05_0000838 (LandPlants) Phylogenetic Tree(s): OG_05_0000838_tree ,
OG_06_0000418 (SeedPlants) Phylogenetic Tree(s): OG_06_0000418_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00102p00030630
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00189920 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00008p00245610 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00008p00247230 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00031p00086240 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00080p00155280 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00161p00055170 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Neighborhood
CC GO:0005849 mRNA cleavage factor complex IEP Neighborhood
BP GO:0006378 mRNA polyadenylation IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!