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  5. AMTR_s00102p00073930

AMTR_s00102p00073930 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00102.35

Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0000103 (Archaeplastida) Phylogenetic Tree(s): OG0000103_tree ,
OG_05_0000039 (LandPlants) Phylogenetic Tree(s): OG_05_0000039_tree ,
OG_06_0000107 (SeedPlants) Phylogenetic Tree(s): OG_06_0000107_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00102p00073930
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT2G26940 No alias C2H2-type zinc finger family protein 0.03 Archaeplastida
AT3G60580 No alias C2H2-like zinc finger protein 0.11 Archaeplastida
AT5G03510 No alias C2H2-type zinc finger family protein 0.05 Archaeplastida
AT5G43170 AZF3, ZF3 zinc-finger protein 3 0.07 Archaeplastida
GSVIVT01033678001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
GSVIVT01037851001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
LOC_Os01g62190.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os03g60540.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
LOC_Os04g08060.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os05g38600.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os08g20580.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_10426425g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_109421g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_167434g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_19127g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_5277601g0010 No alias no hits & (original description: none) 0.11 Archaeplastida
MA_858691g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_93487g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc01g107170.2.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc06g060740.3.1 No alias C2H2 zinc finger transcription factor 0.08 Archaeplastida
Solyc06g074800.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc12g088390.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e002063_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e006184_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e011756_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e011983_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e029605_P001 No alias C2H2 zinc finger transcription factor 0.01 Archaeplastida
Zm00001e038464_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
BP GO:0043086 negative regulation of catalytic activity IEP Neighborhood
BP GO:0044092 negative regulation of molecular function IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!