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  5. AMTR_s00102p00092780

AMTR_s00102p00092780 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00102.48

Description : Secondary metabolism.phenolics.flavonoid synthesis and modification.chalcone synthase


Gene families : OG0000336 (Archaeplastida) Phylogenetic Tree(s): OG0000336_tree ,
OG_05_0000154 (LandPlants) Phylogenetic Tree(s): OG_05_0000154_tree ,
OG_06_0000206 (SeedPlants) Phylogenetic Tree(s): OG_06_0000206_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00102p00092780
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AT5G13930 CHS, TT4, ATCHS Chalcone and stilbene synthase family protein 0.03 Archaeplastida
GSVIVT01010554001 No alias Secondary metabolism.phenolics.flavonoid synthesis and... 0.04 Archaeplastida
GSVIVT01010561001 No alias Stilbene synthase 1 OS=Vitis vinifera 0.03 Archaeplastida
GSVIVT01010572001 No alias Secondary metabolism.phenolics.flavonoid synthesis and... 0.03 Archaeplastida
GSVIVT01010590001 No alias Secondary metabolism.phenolics.flavonoid synthesis and... 0.04 Archaeplastida
Gb_01519 No alias chalcone synthase 0.03 Archaeplastida
Gb_32469 No alias chalcone synthase 0.02 Archaeplastida
Gb_35771 No alias chalcone synthase 0.03 Archaeplastida
LOC_Os07g11440.1 No alias chalcone synthase 0.02 Archaeplastida
MA_10426264g0020 No alias chalcone synthase 0.04 Archaeplastida
MA_10434819g0010 No alias chalcone synthase 0.03 Archaeplastida
MA_20764g0010 No alias chalcone synthase 0.03 Archaeplastida
MA_5735g0010 No alias chalcone synthase 0.03 Archaeplastida
MA_6172876g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_84838g0010 No alias chalcone synthase 0.03 Archaeplastida
Mp2g07060.1 No alias chalcone synthase 0.03 Archaeplastida
Mp2g22700.1 No alias chalcone synthase 0.02 Archaeplastida
Mp4g14180.1 No alias chalcone synthase 0.02 Archaeplastida
Mp4g14190.1 No alias chalcone synthase 0.02 Archaeplastida
Mp4g14200.1 No alias chalcone synthase 0.02 Archaeplastida
Mp4g14450.1 No alias chalcone synthase 0.03 Archaeplastida
Pp3c18_5400V3.1 No alias Chalcone and stilbene synthase family protein 0.04 Archaeplastida
Pp3c21_7660V3.1 No alias Chalcone and stilbene synthase family protein 0.03 Archaeplastida
Pp3c21_7690V3.1 No alias Chalcone and stilbene synthase family protein 0.03 Archaeplastida
Pp3c24_13090V3.1 No alias Chalcone and stilbene synthase family protein 0.04 Archaeplastida
Pp3c24_13120V3.1 No alias Chalcone and stilbene synthase family protein 0.03 Archaeplastida
Pp3c3_17000V3.1 No alias Chalcone and stilbene synthase family protein 0.02 Archaeplastida
Solyc05g053170.3.1 No alias chalcone synthase 0.05 Archaeplastida
Solyc05g053550.3.1 No alias chalcone synthase 0.03 Archaeplastida
Solyc09g091510.3.1 No alias chalcone synthase 0.03 Archaeplastida
Zm00001e014215_P001 No alias Chalcone synthase 3 OS=Bromheadia finlaysoniana... 0.03 Archaeplastida
Zm00001e017399_P001 No alias Enzyme classification.EC_2 transferases.EC_2.3... 0.02 Archaeplastida
Zm00001e017400_P002 No alias Enzyme classification.EC_2 transferases.EC_2.3... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016746 transferase activity, transferring acyl groups IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004013 adenosylhomocysteinase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006730 one-carbon metabolic process IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
BP GO:0015893 drug transport IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016801 hydrolase activity, acting on ether bonds IEP Neighborhood
MF GO:0016802 trialkylsulfonium hydrolase activity IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0047134 protein-disulfide reductase activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR012328 Chalcone/stilbene_synth_C 236 386
IPR001099 Chalcone/stilbene_synthase_N 3 227
No external refs found!