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  5. AMTR_s00103p00026300

AMTR_s00103p00026300 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00103.8

Description : Chromatin organisation.histone modifications.histone lysine methylation/demethylation.COMPASS histone trimethylation complex.WDR5 component


Gene families : OG0001835 (Archaeplastida) Phylogenetic Tree(s): OG0001835_tree ,
OG_05_0001929 (LandPlants) Phylogenetic Tree(s): OG_05_0001929_tree ,
OG_06_0001958 (SeedPlants) Phylogenetic Tree(s): OG_06_0001958_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00103p00026300
Cluster HCCA: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000378.20 No alias Chromatin organisation.histone modifications.histone... 0.01 Archaeplastida
Cpa|evm.model.tig00020902.59 No alias Transcription initiation factor TFIID subunit 5... 0.02 Archaeplastida
Cpa|evm.model.tig00021238.2 No alias No description available 0.01 Archaeplastida
Smo169971 No alias Chromatin organisation.histone modifications.histone... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 16 49
IPR001680 WD40_repeat 142 180
IPR001680 WD40_repeat 197 223
IPR001680 WD40_repeat 227 268
IPR001680 WD40_repeat 63 95
IPR001680 WD40_repeat 100 137
IPR001680 WD40_repeat 274 311
No external refs found!