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  5. AMTR_s00103p00118930

AMTR_s00103p00118930 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00103.71

No description available


Gene families : OG0003722 (Archaeplastida) Phylogenetic Tree(s): OG0003722_tree ,
OG_05_0002579 (LandPlants) Phylogenetic Tree(s): OG_05_0002579_tree ,
OG_06_0001800 (SeedPlants) Phylogenetic Tree(s): OG_06_0001800_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00103p00118930
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AT2G26520 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 Archaeplastida
LOC_Os01g66544.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_133281g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_460378g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_83232g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc04g015540.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e019012_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0006184 obsolete GTP catabolic process IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0051258 protein polymerization IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!