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  5. AMTR_s00103p00120350

AMTR_s00103p00120350 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00103.73

Description : Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo assembly.RbcX assembly factor


Gene families : OG0006006 (Archaeplastida) Phylogenetic Tree(s): OG0006006_tree ,
OG_05_0005006 (LandPlants) Phylogenetic Tree(s): OG_05_0005006_tree ,
OG_06_0005189 (SeedPlants) Phylogenetic Tree(s): OG_06_0005189_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00103p00120350
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01025257001 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.04 Archaeplastida
Gb_25794 No alias RbcX assembly factor involved in RuBisCo assembly 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003435 Chaperonin_RcbX 103 201
No external refs found!