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  5. AMTR_s00103p00158520

AMTR_s00103p00158520 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00103.116

No description available


Gene families : OG0004618 (Archaeplastida) Phylogenetic Tree(s): OG0004618_tree ,
OG_05_0005326 (LandPlants) Phylogenetic Tree(s): OG_05_0005326_tree ,
OG_06_0007264 (SeedPlants) Phylogenetic Tree(s): OG_06_0007264_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00103p00158520
Cluster HCCA: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
Gb_11611 No alias component GID5 of ubiquitin protein ligase complex 0.02 Archaeplastida
MA_148408g0010 No alias component GID5 of ubiquitin protein ligase complex 0.03 Archaeplastida
MA_151327g0010 No alias component GID5 of ubiquitin protein ligase complex 0.03 Archaeplastida
MA_156879g0010 No alias component GID5 of ubiquitin protein ligase complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003951 NAD+ kinase activity IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006739 NADP metabolic process IEP Neighborhood
BP GO:0006741 NADP biosynthetic process IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Neighborhood
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000225 Armadillo 425 459
No external refs found!