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  5. AMTR_s00104p00072030

AMTR_s00104p00072030 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00104.23

Description : Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase


Gene families : OG0000439 (Archaeplastida) Phylogenetic Tree(s): OG0000439_tree ,
OG_05_0012747 (LandPlants) Phylogenetic Tree(s): OG_05_0012747_tree ,
OG_06_0012719 (SeedPlants) Phylogenetic Tree(s): OG_06_0012719_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00104p00072030
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AT3G62710 No alias Glycosyl hydrolase family protein 0.05 Archaeplastida
GSVIVT01023452001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 Archaeplastida
GSVIVT01023455001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 Archaeplastida
MA_719501g0010 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 Archaeplastida
Mp4g13480.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.02 Archaeplastida
Pp3c6_240V3.1 No alias Glycosyl hydrolase family protein 0.03 Archaeplastida
Solyc06g073750.4.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR001764 Glyco_hydro_3_N 2 133
No external refs found!