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  5. AMTR_s00105p00025610

AMTR_s00105p00025610 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00105.6

No description available


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0006168 (LandPlants) Phylogenetic Tree(s): OG_05_0006168_tree ,
OG_06_0005818 (SeedPlants) Phylogenetic Tree(s): OG_06_0005818_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00105p00025610
Cluster HCCA: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00083p00123850 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AT5G02320 ATMYB3R5, MYB3R-5 myb domain protein 3r-5 0.03 Archaeplastida
LOC_Os07g04700.1 No alias component SNAPC4 of SNAP snRNA transcription factor... 0.04 Archaeplastida
Zm00001e010546_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e041535_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP Neighborhood
MF GO:0003964 RNA-directed DNA polymerase activity IEP Neighborhood
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
BP GO:0051301 cell division IEP Neighborhood
BP GO:0071897 DNA biosynthetic process IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!