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  5. AMTR_s00106p00040830

AMTR_s00106p00040830 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00106.21

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000101 (LandPlants) Phylogenetic Tree(s): OG_05_0000101_tree ,
OG_06_0000391 (SeedPlants) Phylogenetic Tree(s): OG_06_0000391_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00106p00040830
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00096800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AT5G42630 KAN4, ATS Homeodomain-like superfamily protein 0.03 Archaeplastida
AT5G45580 No alias Homeodomain-like superfamily protein 0.06 Archaeplastida
GSVIVT01012707001 No alias No description available 0.03 Archaeplastida
GSVIVT01013085001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01021072001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01021225001 No alias Putative Myb family transcription factor At1g14600... 0.05 Archaeplastida
GSVIVT01032776001 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
Gb_08427 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Gb_27262 No alias G2-like GARP transcription factor 0.06 Archaeplastida
LOC_Os02g04640.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os02g14490.1 No alias Putative Myb family transcription factor At1g14600... 0.06 Archaeplastida
LOC_Os03g03760.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os04g51130.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g35140.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os08g33750.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os09g23200.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os10g39550.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
LOC_Os11g01480.1 No alias Putative Myb family transcription factor At1g14600... 0.03 Archaeplastida
LOC_Os12g01490.1 No alias Putative Myb family transcription factor At1g14600... 0.03 Archaeplastida
MA_138039g0010 No alias G2-like GARP transcription factor 0.03 Archaeplastida
MA_28188g0010 No alias G2-like GARP transcription factor 0.03 Archaeplastida
MA_52379g0010 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Pp3c10_13030V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c21_2850V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c24_7590V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c8_16910V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Smo405704 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Smo423505 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc02g076670.3.1 No alias Putative Myb family transcription factor At1g14600... 0.05 Archaeplastida
Solyc02g080730.2.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Solyc02g080740.3.1 No alias G2-like GARP transcription factor 0.06 Archaeplastida
Solyc03g006150.2.1 No alias Putative Myb family transcription factor At1g14600... 0.06 Archaeplastida
Solyc04g008480.2.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Solyc04g050070.3.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Solyc05g055940.3.1 No alias PHR1 transcription factor involved in proline synthesis... 0.02 Archaeplastida
Solyc07g045000.4.1 No alias Putative Myb family transcription factor At1g14600... 0.05 Archaeplastida
Solyc08g005260.2.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Solyc08g076400.3.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Solyc10g078720.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc12g006280.3.1 No alias Putative Myb family transcription factor At1g14600... 0.03 Archaeplastida
Zm00001e003093_P001 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e005097_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e009294_P001 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
Zm00001e013758_P003 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e015514_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e034056_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e037731_P001 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e040203_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 22 73
No external refs found!