AMTR_s00106p00046740 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00106.25

Description : Protein biosynthesis.aminoacyl-tRNA synthetase activities.leucine-tRNA ligase


Gene families : OG0004918 (Archaeplastida) Phylogenetic Tree(s): OG0004918_tree ,
OG_05_0006347 (LandPlants) Phylogenetic Tree(s): OG_05_0006347_tree ,
OG_06_0007205 (SeedPlants) Phylogenetic Tree(s): OG_06_0007205_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00106p00046740
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AT4G04350 EMB2369 tRNA synthetase class I (I, L, M and V) family protein 0.03 Archaeplastida
Cpa|evm.model.tig00000865.51 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 Archaeplastida
Cre13.g578451 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.05 Archaeplastida
GSVIVT01012668001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.12 Archaeplastida
Gb_36904 No alias leucine-tRNA ligase 0.09 Archaeplastida
LOC_Os01g03020.1 No alias leucine-tRNA ligase 0.05 Archaeplastida
MA_293362g0010 No alias No annotation 0.05 Archaeplastida
MA_413765g0010 No alias leucine-tRNA ligase 0.04 Archaeplastida
Mp3g22600.1 No alias leucine-tRNA ligase 0.04 Archaeplastida
Pp3c7_13710V3.1 No alias tRNA synthetase class I (I, L, M and V) family protein 0.05 Archaeplastida
Solyc02g080990.2.1 No alias leucine-tRNA ligase 0.02 Archaeplastida
Zm00001e025691_P001 No alias leucine-tRNA ligase 0.09 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0002161 aminoacyl-tRNA editing activity IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0003989 acetyl-CoA carboxylase activity IEP Neighborhood
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Neighborhood
MF GO:0004645 phosphorylase activity IEP Neighborhood
MF GO:0004659 prenyltransferase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0004789 thiamine-phosphate diphosphorylase activity IEP Neighborhood
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006470 protein dephosphorylation IEP Neighborhood
BP GO:0006772 thiamine metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008184 glycogen phosphorylase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009228 thiamine biosynthetic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
MF GO:0016149 translation release factor activity, codon specific IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016421 CoA carboxylase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Neighborhood
MF GO:0016987 sigma factor activity IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0042723 thiamine-containing compound metabolic process IEP Neighborhood
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
MF GO:0046422 violaxanthin de-epoxidase activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR015413 Methionyl/Leucyl_tRNA_Synth 127 259
IPR002300 aa-tRNA-synth_Ia 733 760
IPR025709 Leu_tRNA-synth_edit 308 502
IPR013155 M/V/L/I-tRNA-synth_anticd-bd 818 931
No external refs found!