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  5. AMTR_s00106p00100050

AMTR_s00106p00100050 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00106.71

No description available


Gene families : OG0008506 (Archaeplastida) Phylogenetic Tree(s): OG0008506_tree ,
OG_05_0008183 (LandPlants) Phylogenetic Tree(s): OG_05_0008183_tree ,
OG_06_0008254 (SeedPlants) Phylogenetic Tree(s): OG_06_0008254_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00106p00100050
Cluster HCCA: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
AT4G00060 MEE44 Nucleotidyltransferase family protein 0.05 Archaeplastida
GSVIVT01018154001 No alias No description available 0.07 Archaeplastida
Gb_00149 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g45800.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp2g23120.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c16_11310V3.1 No alias Nucleotidyltransferase family protein 0.04 Archaeplastida
Solyc01g090860.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e030357_P002 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004181 metallocarboxypeptidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
MF GO:0008235 metalloexopeptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
CC GO:0032040 small-subunit processome IEP Neighborhood
InterPro domains Description Start Stop
IPR002058 PAP_assoc 1433 1486
IPR002934 Polymerase_NTP_transf_dom 1194 1281
No external refs found!