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  5. AT1G59690

AT1G59690


Description : F-box associated ubiquitination effector family protein


Gene families : OG0000466 (Archaeplastida) Phylogenetic Tree(s): OG0000466_tree ,
OG_05_0000239 (LandPlants) Phylogenetic Tree(s): OG_05_0000239_tree ,
OG_06_0000111 (SeedPlants) Phylogenetic Tree(s): OG_06_0000111_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G59690
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AT1G26515 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT1G30780 No alias F-box associated ubiquitination effector family protein 0.08 Archaeplastida
AT1G30790 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT1G30920 No alias F-box family protein 0.07 Archaeplastida
AT1G31090 No alias F-box family protein 0.07 Archaeplastida
AT1G31620 No alias unknown protein; Has 9 Blast hits to 9 proteins in 2... 0.03 Archaeplastida
AT1G32660 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT1G43005 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.03 Archaeplastida
AT1G46840 No alias F-box family protein 0.03 Archaeplastida
AT1G47810 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT1G50880 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT1G52490 No alias CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like... 0.04 Archaeplastida
AT1G52495 No alias No description available 0.04 Archaeplastida
AT1G53360 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT1G53370 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT1G60370 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT1G61060 No alias F-box family protein 0.05 Archaeplastida
AT1G67130 No alias F-box family protein 0.05 Archaeplastida
AT1G70970 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT2G16220 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT2G16450 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT2G16810 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT2G31470 DOR F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT2G32470 No alias F-box associated ubiquitination effector family protein 0.05 Archaeplastida
AT3G04660 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G49440 No alias F-box associated ubiquitination effector family protein 0.02 Archaeplastida
AT3G52320 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT4G11590 No alias F-box associated ubiquitination effector family protein 0.03 Archaeplastida
AT4G19940 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT5G22791 No alias F-box family protein 0.05 Archaeplastida
AT5G42430 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT5G44345 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT5G52610 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT5G62060 No alias F-box and associated interaction domains-containing protein 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0004044 amidophosphoribosyltransferase activity IEP Neighborhood
MF GO:0005345 purine nucleobase transmembrane transporter activity IEP Neighborhood
BP GO:0006144 purine nucleobase metabolic process IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
BP GO:0006863 purine nucleobase transport IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
BP GO:0009112 nucleobase metabolic process IEP Neighborhood
BP GO:0009113 purine nucleobase biosynthetic process IEP Neighborhood
BP GO:0010208 pollen wall assembly IEP Neighborhood
BP GO:0010584 pollen exine formation IEP Neighborhood
BP GO:0010927 cellular component assembly involved in morphogenesis IEP Neighborhood
BP GO:0015851 nucleobase transport IEP Neighborhood
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
MF GO:0030570 pectate lyase activity IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0035445 borate transmembrane transport IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0046112 nucleobase biosynthetic process IEP Neighborhood
BP GO:0046713 borate transport IEP Neighborhood
MF GO:0046715 active borate transmembrane transporter activity IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0051791 medium-chain fatty acid metabolic process IEP Neighborhood
BP GO:0051792 medium-chain fatty acid biosynthetic process IEP Neighborhood
MF GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity IEP Neighborhood
BP GO:0080110 sporopollenin biosynthetic process IEP Neighborhood
BP GO:0098656 anion transmembrane transport IEP Neighborhood
BP GO:0098661 inorganic anion transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR013187 F-box-assoc_dom_typ3 1 54
No external refs found!