1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00106p00119930

AMTR_s00106p00119930 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00106.91

Description : External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein


Gene families : OG0000342 (Archaeplastida) Phylogenetic Tree(s): OG0000342_tree ,
OG_05_0001792 (LandPlants) Phylogenetic Tree(s): OG_05_0001792_tree ,
OG_06_0001989 (SeedPlants) Phylogenetic Tree(s): OG_06_0001989_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00106p00119930
Cluster HCCA: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
AT1G26230 No alias TCP-1/cpn60 chaperonin family protein 0.05 Archaeplastida
AT1G55490 CPN60B, LEN1 chaperonin 60 beta 0.07 Archaeplastida
AT2G28000 CH-CPN60A, CPN60A, SLP chaperonin-60alpha 0.05 Archaeplastida
AT5G18820 EMB3007 TCP-1/cpn60 chaperonin family protein 0.02 Archaeplastida
ChrSy.fgenesh.mRNA.28 No alias subunit beta of Cpn60 chaperonin complex. component... 0.05 Archaeplastida
Cpa|evm.model.tig00001107.20 No alias RuBisCO large subunit-binding protein subunit alpha,... 0.01 Archaeplastida
Cre04.g231222 No alias External stimuli response.temperature.Hsp... 0.06 Archaeplastida
Cre07.g339150 No alias External stimuli response.temperature.Hsp... 0.05 Archaeplastida
Cre17.g741450 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
GSVIVT01010149001 No alias External stimuli response.temperature.Hsp... 0.04 Archaeplastida
GSVIVT01017032001 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
GSVIVT01031526001 No alias External stimuli response.temperature.Hsp... 0.03 Archaeplastida
Gb_25193 No alias RuBisCO large subunit-binding protein subunit beta,... 0.03 Archaeplastida
LOC_Os06g02380.2 No alias subunit beta of Cpn60 chaperonin complex. component... 0.04 Archaeplastida
LOC_Os09g38980.1 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.02 Archaeplastida
LOC_Os12g17910.1 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.04 Archaeplastida
MA_13240g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_542957g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_97627g0010 No alias Chaperonin 60 subunit beta 2, chloroplastic... 0.02 Archaeplastida
Mp1g21640.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.06 Archaeplastida
Mp5g20470.1 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.08 Archaeplastida
Pp3c16_4660V3.1 No alias chaperonin 60 beta 0.03 Archaeplastida
Pp3c24_12180V3.1 No alias chaperonin-60alpha 0.02 Archaeplastida
Pp3c27_5110V3.1 No alias chaperonin 60 beta 0.02 Archaeplastida
Pp3c4_22500V3.1 No alias heat shock protein 60 0.02 Archaeplastida
Pp3c6_20400V3.1 No alias chaperonin 60 beta 0.04 Archaeplastida
Pp3c8_16290V3.1 No alias chaperonin-60alpha 0.04 Archaeplastida
Smo168153 No alias External stimuli response.temperature.Hsp... 0.06 Archaeplastida
Solyc01g028810.3.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.05 Archaeplastida
Solyc03g120850.4.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.05 Archaeplastida
Solyc05g010240.4.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.02 Archaeplastida
Solyc11g069790.2.1 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.04 Archaeplastida
Zm00001e001025_P002 No alias subunit beta of Cpn60 chaperonin complex. component... 0.03 Archaeplastida
Zm00001e012733_P002 No alias chaperone (Hsp60) 0.01 Archaeplastida
Zm00001e029825_P001 No alias subunit beta of Cpn60 chaperonin complex. component... 0.09 Archaeplastida
Zm00001e031536_P001 No alias subunit alpha of Cpn60 chaperonin complex. component... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0044267 cellular protein metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003989 acetyl-CoA carboxylase activity IEP Neighborhood
MF GO:0004109 coproporphyrinogen oxidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004655 porphobilinogen synthase activity IEP Neighborhood
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
MF GO:0004784 superoxide dismutase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0009094 L-phenylalanine biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
CC GO:0009317 acetyl-CoA carboxylase complex IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016149 translation release factor activity, codon specific IEP Neighborhood
MF GO:0016421 CoA carboxylase activity IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Neighborhood
MF GO:0016987 sigma factor activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 91 594
No external refs found!