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  5. AMTR_s00106p00146860

AMTR_s00106p00146860 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00106.119

Description : Lipid metabolism.fatty acid synthesis.citrate shuttle.cytosolic NAD-dependent malate dehydrogenase


Gene families : OG0002137 (Archaeplastida) Phylogenetic Tree(s): OG0002137_tree ,
OG_05_0003024 (LandPlants) Phylogenetic Tree(s): OG_05_0003024_tree ,
OG_06_0003722 (SeedPlants) Phylogenetic Tree(s): OG_06_0003722_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00106p00146860

Target Alias Description ECC score Gene Family Method Actions
MA_164402g0010 No alias Malate dehydrogenase 1, cytoplasmic OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
InterPro domains Description Start Stop
IPR022383 Lactate/malate_DH_C 180 345
IPR001236 Lactate/malate_DH_N 59 136
IPR001236 Lactate/malate_DH_N 143 177
No external refs found!