AMTR_s00107p00095070 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00107.26

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.DREB-type transcription factor

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000007 (SeedPlants) Phylogenetic Tree(s): OG_06_0000007_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00107p00095070
Cluster	HCCA: Cluster_215

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00069p00132820	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.04	Archaeplastida
AMTR_s00089p00102760	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00099p00029210	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AT1G12610	DDF1	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT1G44830	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G77200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G13620	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G28140	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT5G13910	LEP	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT5G18560	PUCHI	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G19790	RAP2.11	related to AP2 11	0.04	Archaeplastida
AT5G25390	SHN2	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
GSVIVT01010629001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01017315001	No alias	Cell wall.cutin and suberin.biosynthesis...	0.03	Archaeplastida
GSVIVT01018272001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01022076001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01033793001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
Gb_03782	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_07992	No alias	Ethylene-responsive transcription factor RAP2-9...	0.03	Archaeplastida
Gb_08437	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_08642	No alias	Ethylene-responsive transcription factor ABI4 OS=Oryza...	0.02	Archaeplastida
Gb_09495	No alias	transcription factor (ERF). transcription factor (ERN1)	0.02	Archaeplastida
Gb_12583	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_16683	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_26855	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_26858	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_26863	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_29263	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_32532	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_34846	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_36622	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_41294	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os01g10370.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os02g10760.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
LOC_Os02g13710.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os02g43820.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os02g45420.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os02g52670.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
LOC_Os04g46410.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
LOC_Os04g56150.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os05g36100.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os05g41760.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os06g36000.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
LOC_Os06g40150.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.04	Archaeplastida
LOC_Os07g47330.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os08g07700.1	No alias	Ethylene-responsive transcription factor ERF087...	0.02	Archaeplastida
LOC_Os08g35240.1	No alias	Ethylene-responsive transcription factor ERF017...	0.03	Archaeplastida
LOC_Os10g38000.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
LOC_Os10g41330.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os11g06770.2	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os11g13840.1	No alias	transcription factor (DREB)	0.05	Archaeplastida
MA_10266433g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_10432141g0020	No alias	Ethylene-responsive transcription factor ERF013...	0.03	Archaeplastida
MA_10432800g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_15251g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_179692g0020	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_214063g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_40048g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_4182g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_42369g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_4929994g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
MA_54341g0010	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
MA_647924g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_66442g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_6677438g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_7960347g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_8384767g0010	No alias	transcription factor (DREB)	0.05	Archaeplastida
MA_891091g0010	No alias	Ethylene-responsive transcription factor 1A...	0.03	Archaeplastida
MA_9160409g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_957g0010	No alias	no hits & (original description: none)	0.05	Archaeplastida
MA_9786598g0010	No alias	transcription factor (ERF)	0.05	Archaeplastida
Pp3c10_17870V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
Pp3c10_20000V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c13_4270V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c25_1760V3.1	No alias	related to AP2 11	0.03	Archaeplastida
Pp3c26_13260V3.1	No alias	ethylene responsive element binding factor 1	0.05	Archaeplastida
Pp3c4_2660V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c6_20480V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Smo80895	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Solyc01g005630.3.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Solyc01g090345.1.1	No alias	Ethylene-responsive transcription factor 13...	0.05	Archaeplastida
Solyc04g080910.1.1	No alias	transcription factor (DREB)	0.04	Archaeplastida
Solyc05g050790.3.1	No alias	transcription factor (ERF)	0.06	Archaeplastida
Solyc05g050830.3.1	No alias	transcription factor (DREB)	0.06	Archaeplastida
Solyc06g051840.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc08g078410.2.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc09g091950.1.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc11g011750.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e014659_P001	No alias	no hits & (original description: none)	0.05	Archaeplastida
Zm00001e015314_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e022016_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e032434_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e034661_P001	No alias	Ethylene-responsive transcription factor ERF115...	0.05	Archaeplastida
Zm00001e036130_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e037404_P001	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.05	Archaeplastida
Zm00001e041288_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0003840	obsolete gamma-glutamyltransferase activity	IEP	Neighborhood
MF	GO:0003905	alkylbase DNA N-glycosylase activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004871	obsolete signal transducer activity	IEP	Neighborhood
MF	GO:0005507	copper ion binding	IEP	Neighborhood
BP	GO:0005975	carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0006284	base-excision repair	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
BP	GO:0006720	isoprenoid metabolic process	IEP	Neighborhood
BP	GO:0006721	terpenoid metabolic process	IEP	Neighborhood
BP	GO:0006749	glutathione metabolic process	IEP	Neighborhood
BP	GO:0006801	superoxide metabolic process	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Neighborhood
BP	GO:0008610	lipid biosynthetic process	IEP	Neighborhood
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEP	Neighborhood
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEP	Neighborhood
BP	GO:0016114	terpenoid biosynthetic process	IEP	Neighborhood
MF	GO:0016744	transferase activity, transferring aldehyde or ketonic groups	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Neighborhood
MF	GO:0019104	DNA N-glycosylase activity	IEP	Neighborhood
MF	GO:0022804	active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0043733	DNA-3-methylbase glycosylase activity	IEP	Neighborhood
BP	GO:0044255	cellular lipid metabolic process	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	138	188

External Links

No external refs found!

AMTR_s00107p00095070 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation