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  5. AMTR_s00109p00058750

AMTR_s00109p00058750 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00109.43

Description : Dynein 8 kDa light chain, flagellar outer arm OS=Chlamydomonas reinhardtii


Gene families : OG0000441 (Archaeplastida) Phylogenetic Tree(s): OG0000441_tree ,
OG_05_0002379 (LandPlants) Phylogenetic Tree(s): OG_05_0002379_tree ,
OG_06_0004214 (SeedPlants) Phylogenetic Tree(s): OG_06_0004214_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00109p00058750
Cluster HCCA: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00270190 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
MA_10432415g0020 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005875 microtubule associated complex IEA Interproscan
BP GO:0007017 microtubule-based process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Neighborhood
MF GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008649 rRNA methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016433 rRNA (adenine) methyltransferase activity IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
CC GO:0030131 clathrin adaptor complex IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
InterPro domains Description Start Stop
IPR001372 Dynein_light_chain_typ-1/2 1 90
No external refs found!