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  5. AMTR_s00109p00114170

AMTR_s00109p00114170 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00109.112

Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0000624 (Archaeplastida) Phylogenetic Tree(s): OG0000624_tree ,
OG_05_0000347 (LandPlants) Phylogenetic Tree(s): OG_05_0000347_tree ,
OG_06_0000255 (SeedPlants) Phylogenetic Tree(s): OG_06_0000255_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00109p00114170
Cluster HCCA: Cluster_240

Target Alias Description ECC score Gene Family Method Actions
AT2G20100 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT3G20640 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
GSVIVT01015353001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01038142001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Gb_26693 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc02g079760.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc04g080710.4.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc06g066580.4.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc07g020960.3.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
Zm00001e034854_P002 No alias transcription factor (bHLH) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008219 cell death IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!