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  5. AMTR_s00109p00120700

AMTR_s00109p00120700 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00109.120

Description : Auxin-responsive protein IAA8 OS=Arabidopsis thaliana


Gene families : OG0000129 (Archaeplastida) Phylogenetic Tree(s): OG0000129_tree ,
OG_05_0000051 (LandPlants) Phylogenetic Tree(s): OG_05_0000051_tree ,
OG_06_0000110 (SeedPlants) Phylogenetic Tree(s): OG_06_0000110_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00109p00120700
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AT1G04250 AXR3, IAA17 AUX/IAA transcriptional regulator family protein 0.03 Archaeplastida
AT2G22670 IAA8 indoleacetic acid-induced protein 8 0.03 Archaeplastida
AT4G14550 SLR, IAA14 indole-3-acetic acid inducible 14 0.03 Archaeplastida
LOC_Os01g18360.1 No alias Auxin-responsive protein IAA4 OS=Oryza sativa subsp.... 0.04 Archaeplastida
LOC_Os03g43410.1 No alias Auxin-responsive protein IAA12 OS=Oryza sativa subsp.... 0.05 Archaeplastida
LOC_Os05g44810.2 No alias repressor component Aux/IAA of auxin receptor complex 0.05 Archaeplastida
LOC_Os12g40900.1 No alias Auxin-responsive protein IAA31 OS=Oryza sativa subsp.... 0.03 Archaeplastida
MA_38g0010 No alias Auxin-responsive protein IAA27 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_608803g0010 No alias Auxin-responsive protein IAA16 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_8842034g0010 No alias Auxin-responsive protein IAA13 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c24_6610V3.1 No alias indole-3-acetic acid 7 0.06 Archaeplastida
Smo85035 No alias Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
Solyc03g121060.4.1 No alias repressor component Aux/IAA of auxin receptor complex 0.03 Archaeplastida
Solyc06g084070.3.1 No alias Auxin-responsive protein IAA4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc09g064530.3.1 No alias Auxin-responsive protein IAA13 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e011863_P002 No alias Auxin-responsive protein IAA24 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e018054_P001 No alias Auxin-responsive protein IAA31 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e030609_P002 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
InterPro domains Description Start Stop
IPR003311 AUX_IAA 45 339
No external refs found!