AT1G59940 (ARR3)

Aliases : ARR3

Description : response regulator 3

Gene families : OG0000168 (Archaeplastida) Phylogenetic Tree(s): OG0000168_tree ,
OG_05_0000079 (LandPlants) Phylogenetic Tree(s): OG_05_0000079_tree ,
OG_06_0000254 (SeedPlants) Phylogenetic Tree(s): OG_06_0000254_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G59940
Cluster	HCCA: Cluster_158

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00063p00116400	evm_27.TU.AmTr_v1...	Phytohormones.cytokinin.perception and signal...	0.05	Archaeplastida
AMTR_s00099p00091470	evm_27.TU.AmTr_v1...	Phytohormones.cytokinin.perception and signal...	0.03	Archaeplastida
AMTR_s00099p00091790	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
GSVIVT01008850001	No alias	Phytohormones.cytokinin.perception and signal...	0.03	Archaeplastida
GSVIVT01025556001	No alias	Multi-process regulation.circadian clock.PRR...	0.04	Archaeplastida
GSVIVT01033610001	No alias	Phytohormones.cytokinin.perception and signal...	0.03	Archaeplastida
Gb_15621	No alias	A-type cytokinin ARR response negative regulator	0.03	Archaeplastida
LOC_Os08g26990.1	No alias	A-type cytokinin ARR response negative regulator	0.03	Archaeplastida
LOC_Os08g28900.1	No alias	A-type cytokinin ARR response negative regulator	0.03	Archaeplastida
MA_111961g0010	No alias	A-type cytokinin ARR response negative regulator	0.03	Archaeplastida
MA_132682g0010	No alias	A-type cytokinin ARR response negative regulator	0.02	Archaeplastida
MA_73095g0010	No alias	A-type cytokinin ARR response negative regulator	0.02	Archaeplastida
MA_89669g0010	No alias	A-type cytokinin ARR response negative regulator	0.03	Archaeplastida
Mp3g03810.1	No alias	A-type cytokinin ARR response negative regulator	0.03	Archaeplastida
Pp3c23_6230V3.1	No alias	response regulator 3	0.02	Archaeplastida
Zm00001e018596_P002	No alias	A-type cytokinin ARR response negative regulator	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000156	phosphorelay response regulator activity	IDA	Interproscan
MF	GO:0000156	phosphorelay response regulator activity	ISS	Interproscan
BP	GO:0000160	phosphorelay signal transduction system	IDA	Interproscan
BP	GO:0000160	phosphorelay signal transduction system	TAS	Interproscan
MF	GO:0003674	molecular_function	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005737	cytoplasm	IDA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007623	circadian rhythm	IMP	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009735	response to cytokinin	IEP	Interproscan
BP	GO:0009736	cytokinin-activated signaling pathway	TAS	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010017	red or far-red light signaling pathway	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010114	response to red light	IMP	Interproscan
BP	GO:0010161	red light signaling pathway	IMP	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042752	regulation of circadian rhythm	IGI	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048511	rhythmic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071478	cellular response to radiation	None	Extended
BP	GO:0071482	cellular response to light stimulus	None	Extended
BP	GO:0071489	cellular response to red or far red light	None	Extended
BP	GO:0071491	cellular response to red light	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Neighborhood
MF	GO:0003954	NADH dehydrogenase activity	IEP	Neighborhood
MF	GO:0003978	UDP-glucose 4-epimerase activity	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
CC	GO:0005795	Golgi stack	IEP	Neighborhood
BP	GO:0006694	steroid biosynthetic process	IEP	Neighborhood
BP	GO:0006811	ion transport	IEP	Neighborhood
BP	GO:0006812	cation transport	IEP	Neighborhood
BP	GO:0006820	anion transport	IEP	Neighborhood
BP	GO:0006825	copper ion transport	IEP	Neighborhood
BP	GO:0006826	iron ion transport	IEP	Neighborhood
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEP	Neighborhood
MF	GO:0008172	S-methyltransferase activity	IEP	Neighborhood
BP	GO:0008202	steroid metabolic process	IEP	Neighborhood
BP	GO:0009267	cellular response to starvation	IEP	Neighborhood
BP	GO:0009269	response to desiccation	IEP	Neighborhood
BP	GO:0009806	lignan metabolic process	IEP	Neighborhood
BP	GO:0009807	lignan biosynthetic process	IEP	Neighborhood
MF	GO:0009815	1-aminocyclopropane-1-carboxylate oxidase activity	IEP	Neighborhood
BP	GO:0009969	xyloglucan biosynthetic process	IEP	Neighborhood
BP	GO:0010030	positive regulation of seed germination	IEP	Neighborhood
BP	GO:0010053	root epidermal cell differentiation	IEP	Neighborhood
BP	GO:0010054	trichoblast differentiation	IEP	Neighborhood
BP	GO:0010106	cellular response to iron ion starvation	IEP	Neighborhood
BP	GO:0010167	response to nitrate	IEP	Neighborhood
BP	GO:0010359	regulation of anion channel activity	IEP	Neighborhood
BP	GO:0010383	cell wall polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0010411	xyloglucan metabolic process	IEP	Neighborhood
BP	GO:0015698	inorganic anion transport	IEP	Neighborhood
BP	GO:0015706	nitrate transport	IEP	Neighborhood
BP	GO:0016128	phytosteroid metabolic process	IEP	Neighborhood
BP	GO:0016129	phytosteroid biosynthetic process	IEP	Neighborhood
BP	GO:0016131	brassinosteroid metabolic process	IEP	Neighborhood
BP	GO:0016132	brassinosteroid biosynthetic process	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	Neighborhood
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	Neighborhood
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	Neighborhood
MF	GO:0016854	racemase and epimerase activity	IEP	Neighborhood
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	Neighborhood
MF	GO:0018708	thiol S-methyltransferase activity	IEP	Neighborhood
BP	GO:0022898	regulation of transmembrane transporter activity	IEP	Neighborhood
BP	GO:0030001	metal ion transport	IEP	Neighborhood
BP	GO:0030154	cell differentiation	IEP	Neighborhood
BP	GO:0031667	response to nutrient levels	IEP	Neighborhood
BP	GO:0031668	cellular response to extracellular stimulus	IEP	Neighborhood
BP	GO:0031669	cellular response to nutrient levels	IEP	Neighborhood
BP	GO:0032409	regulation of transporter activity	IEP	Neighborhood
BP	GO:0032412	regulation of ion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0042594	response to starvation	IEP	Neighborhood
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044070	regulation of anion transport	IEP	Neighborhood
BP	GO:0046685	response to arsenic-containing substance	IEP	Neighborhood
MF	GO:0050136	NADH dehydrogenase (quinone) activity	IEP	Neighborhood
BP	GO:0052541	plant-type cell wall cellulose metabolic process	IEP	Neighborhood
BP	GO:0052546	cell wall pectin metabolic process	IEP	Neighborhood
BP	GO:0071496	cellular response to external stimulus	IEP	Neighborhood
BP	GO:0090627	plant epidermal cell differentiation	IEP	Neighborhood
BP	GO:1903959	regulation of anion transmembrane transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001789	Sig_transdc_resp-reg_receiver	35	153

External Links

No external refs found!

AT1G59940 (ARR3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation