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  5. AMTR_s00109p00149690

AMTR_s00109p00149690 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00109.165

No description available


Gene families : OG0009756 (Archaeplastida) Phylogenetic Tree(s): OG0009756_tree ,
OG_05_0009813 (LandPlants) Phylogenetic Tree(s): OG_05_0009813_tree ,
OG_06_0008029 (SeedPlants) Phylogenetic Tree(s): OG_06_0008029_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00109p00149690
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00028p00205000 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00056p00021960 evm_27.TU.AmTr_v1... Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00056p00025580 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
CC GO:0005849 mRNA cleavage factor complex IEP Neighborhood
BP GO:0006378 mRNA polyadenylation IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
InterPro domains Description Start Stop
IPR026961 PGG_dom 26 120
No external refs found!