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  5. AMTR_s00109p00149920

AMTR_s00109p00149920 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00109.166

No description available


Gene families : OG0012873 (Archaeplastida) Phylogenetic Tree(s): OG0012873_tree ,
OG_05_0012805 (LandPlants) Phylogenetic Tree(s): OG_05_0012805_tree ,
OG_06_0012794 (SeedPlants) Phylogenetic Tree(s): OG_06_0012794_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00109p00149920
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00177510 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00109p00148210 evm_27.TU.AmTr_v1... Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 4 85
No external refs found!