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Aliases : evm_27.TU.AmTr_v1.0_scaffold00110.10
Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.EDL component
Gene families : OG0003185 (Archaeplastida) Phylogenetic Tree(s): OG0003185_tree ,
OG_05_0002156 (LandPlants) Phylogenetic Tree(s): OG_05_0002156_tree ,
OG_06_0001612 (SeedPlants) Phylogenetic Tree(s): OG_06_0001612_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00110p00036260 | |
| Cluster | HCCA: Cluster_159 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Gb_11280 | No alias | component EDL of SCF E3 ubiquitin ligase complex | 0.02 | Archaeplastida | |
| Smo25407 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000159 | protein phosphatase type 2A complex | IEP | Neighborhood |
| BP | GO:0001505 | regulation of neurotransmitter levels | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
| MF | GO:0004045 | aminoacyl-tRNA hydrolase activity | IEP | Neighborhood |
| MF | GO:0004047 | aminomethyltransferase activity | IEP | Neighborhood |
| MF | GO:0004639 | phosphoribosylaminoimidazolesuccinocarboxamide synthase activity | IEP | Neighborhood |
| MF | GO:0004659 | prenyltransferase activity | IEP | Neighborhood |
| MF | GO:0004665 | prephenate dehydrogenase (NADP+) activity | IEP | Neighborhood |
| CC | GO:0005694 | chromosome | IEP | Neighborhood |
| CC | GO:0005737 | cytoplasm | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006265 | DNA topological change | IEP | Neighborhood |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0006544 | glycine metabolic process | IEP | Neighborhood |
| BP | GO:0006546 | glycine catabolic process | IEP | Neighborhood |
| BP | GO:0006570 | tyrosine metabolic process | IEP | Neighborhood |
| BP | GO:0006571 | tyrosine biosynthetic process | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006914 | autophagy | IEP | Neighborhood |
| CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | Neighborhood |
| MF | GO:0008977 | prephenate dehydrogenase (NAD+) activity | IEP | Neighborhood |
| BP | GO:0009056 | catabolic process | IEP | Neighborhood |
| BP | GO:0009063 | cellular amino acid catabolic process | IEP | Neighborhood |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0009071 | serine family amino acid catabolic process | IEP | Neighborhood |
| BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Neighborhood |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Neighborhood |
| BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | Neighborhood |
| BP | GO:0016054 | organic acid catabolic process | IEP | Neighborhood |
| MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Neighborhood |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Neighborhood |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Neighborhood |
| MF | GO:0016853 | isomerase activity | IEP | Neighborhood |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Neighborhood |
| MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
| BP | GO:0042133 | neurotransmitter metabolic process | IEP | Neighborhood |
| BP | GO:0042135 | neurotransmitter catabolic process | IEP | Neighborhood |
| BP | GO:0042737 | drug catabolic process | IEP | Neighborhood |
| BP | GO:0044248 | cellular catabolic process | IEP | Neighborhood |
| BP | GO:0044282 | small molecule catabolic process | IEP | Neighborhood |
| BP | GO:0046395 | carboxylic acid catabolic process | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
| BP | GO:0061919 | process utilizing autophagic mechanism | IEP | Neighborhood |
| BP | GO:0071103 | DNA conformation change | IEP | Neighborhood |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Neighborhood |
| BP | GO:1901606 | alpha-amino acid catabolic process | IEP | Neighborhood |
| CC | GO:1903293 | phosphatase complex | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |