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  5. AMTR_s00110p00040270

AMTR_s00110p00040270 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00110.14

Description : Pentatricopeptide repeat-containing protein At3g29290 OS=Arabidopsis thaliana


Gene families : OG0009724 (Archaeplastida) Phylogenetic Tree(s): OG0009724_tree ,
OG_05_0010128 (LandPlants) Phylogenetic Tree(s): OG_05_0010128_tree ,
OG_06_0009850 (SeedPlants) Phylogenetic Tree(s): OG_06_0009850_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00110p00040270
Cluster HCCA: Cluster_40


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0003964 RNA-directed DNA polymerase activity IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006471 protein ADP-ribosylation IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0071897 DNA biosynthetic process IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 474 521
IPR002885 Pentatricopeptide_repeat 199 244
IPR002885 Pentatricopeptide_repeat 371 418
IPR002885 Pentatricopeptide_repeat 304 334
IPR002885 Pentatricopeptide_repeat 343 369
IPR002885 Pentatricopeptide_repeat 543 572
IPR002885 Pentatricopeptide_repeat 269 298
No external refs found!