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  5. AMTR_s00110p00045590

AMTR_s00110p00045590 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00110.19

Description : Heparanase-like protein 1 OS=Arabidopsis thaliana


Gene families : OG0001230 (Archaeplastida) Phylogenetic Tree(s): OG0001230_tree ,
OG_05_0000894 (LandPlants) Phylogenetic Tree(s): OG_05_0000894_tree ,
OG_06_0001022 (SeedPlants) Phylogenetic Tree(s): OG_06_0001022_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00110p00045590
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01012851001 No alias Heparanase-like protein 3 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_17663 No alias Heparanase-like protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os06g08090.1 No alias Heparanase-like protein 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os12g38920.1 No alias Heparanase-like protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10433885g0020 No alias Heparanase-like protein 3 OS=Arabidopsis thaliana... 0.01 Archaeplastida
MA_10436001g0010 No alias Phospho-2-dehydro-3-deoxyheptonate aldolase 1,... 0.02 Archaeplastida
Pp3c10_17980V3.1 No alias glucuronidase 3 0.04 Archaeplastida
Pp3c22_10580V3.1 No alias glucuronidase 3 0.02 Archaeplastida
Smo133100 No alias Heparanase-like protein 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc07g007550.3.1 No alias Heparanase-like protein 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006308 DNA catabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005199 Glyco_hydro_79 22 341
No external refs found!