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  5. AMTR_s00110p00051980

AMTR_s00110p00051980 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00110.23

Description : Coenzyme metabolism.iron-sulfur cluster assembly machineries.mitochondrial ISC system.assembly phase.ISD11 component


Gene families : OG0005201 (Archaeplastida) Phylogenetic Tree(s): OG0005201_tree ,
OG_05_0005302 (LandPlants) Phylogenetic Tree(s): OG_05_0005302_tree ,
OG_06_0005618 (SeedPlants) Phylogenetic Tree(s): OG_06_0005618_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00110p00051980
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AT5G61220 No alias LYR family of Fe/S cluster biogenesis protein 0.04 Archaeplastida
LOC_Os10g26640.1 No alias assembly factor ISD11 of mitochondrial ISC system assembly phase 0.03 Archaeplastida
MA_14935g0010 No alias assembly factor ISD11 of mitochondrial ISC system assembly phase 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Neighborhood
MF GO:0004221 obsolete ubiquitin thiolesterase activity IEP Neighborhood
MF GO:0005496 steroid binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0016151 nickel cation binding IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0032934 sterol binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
CC GO:1905354 exoribonuclease complex IEP Neighborhood
InterPro domains Description Start Stop
IPR008011 Complex1_LYR 7 66
No external refs found!