1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00110p00073440

AMTR_s00110p00073440 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00110.38

Description : Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-glucuronic acid synthesis.UDP-D-glucose 6-dehydrogenase


Gene families : OG0001703 (Archaeplastida) Phylogenetic Tree(s): OG0001703_tree ,
OG_05_0001611 (LandPlants) Phylogenetic Tree(s): OG_05_0001611_tree ,
OG_06_0001690 (SeedPlants) Phylogenetic Tree(s): OG_06_0001690_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00110p00073440
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
Gb_18539 No alias UDP-D-glucose 6-dehydrogenase 0.03 Archaeplastida
Gb_30623 No alias UDP-D-glucose 6-dehydrogenase 0.06 Archaeplastida
LOC_Os03g55070.1 No alias UDP-D-glucose 6-dehydrogenase 0.04 Archaeplastida
LOC_Os12g25690.1 No alias UDP-D-glucose 6-dehydrogenase 0.03 Archaeplastida
Pp3c8_22500V3.1 No alias UDP-glucose 6-dehydrogenase family protein 0.02 Archaeplastida
Solyc02g088690.4.1 No alias UDP-D-glucose 6-dehydrogenase 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA Interproscan
MF GO:0051287 NAD binding IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
MF GO:0052736 beta-glucanase activity IEP Neighborhood
MF GO:0052861 glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group IEP Neighborhood
MF GO:0052862 glucan endo-1,4-beta-glucanase activity, C-3 substituted reducing group IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR014027 UDP-Glc/GDP-Man_DH_C 328 451
IPR001732 UDP-Glc/GDP-Man_DH_N 3 186
IPR014026 UDP-Glc/GDP-Man_DH_dimer 209 306
No external refs found!