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Aliases : evm_27.TU.AmTr_v1.0_scaffold00110.64
Description : Expansin-A4 OS=Arabidopsis thaliana
Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0020549 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0019768 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00110p00103570 | |
| Cluster | HCCA: Cluster_181 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00022p00153780 | evm_27.TU.AmTr_v1... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.07 | Archaeplastida | |
| AMTR_s00072p00134750 | evm_27.TU.AmTr_v1... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.02 | Archaeplastida | |
| AMTR_s00140p00077570 | evm_27.TU.AmTr_v1... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | Archaeplastida | |
| AT1G20190 | ATEXPA11, ATHEXP... | expansin 11 | 0.02 | Archaeplastida | |
| AT2G37640 | ATEXPA3, EXP3,... | Barwin-like endoglucanases superfamily protein | 0.03 | Archaeplastida | |
| AT2G40610 | EXPA8, ATHEXP... | expansin A8 | 0.03 | Archaeplastida | |
| AT3G15370 | ATHEXP ALPHA... | expansin 12 | 0.04 | Archaeplastida | |
| AT5G02260 | EXP9, EXPA9,... | expansin A9 | 0.06 | Archaeplastida | |
| AT5G39300 | ATEXPA25,... | expansin A25 | 0.02 | Archaeplastida | |
| AT5G56320 | ATEXP14, EXPA14,... | expansin A14 | 0.02 | Archaeplastida | |
| GSVIVT01023857001 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.05 | Archaeplastida | |
| GSVIVT01028215001 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.05 | Archaeplastida | |
| GSVIVT01028474001 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | Archaeplastida | |
| GSVIVT01032935001 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.04 | Archaeplastida | |
| GSVIVT01033691001 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.02 | Archaeplastida | |
| Gb_01958 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Gb_06139 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Gb_07439 | No alias | alpha-class expansin | 0.05 | Archaeplastida | |
| Gb_11024 | No alias | Expansin-A10 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
| Gb_27617 | No alias | Putative expansin-A17 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| LOC_Os01g16770.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| LOC_Os01g60770.1 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| LOC_Os02g16809.1 | No alias | alpha-class expansin | 0.05 | Archaeplastida | |
| LOC_Os03g06000.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| LOC_Os03g06020.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| LOC_Os05g39990.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| MA_114349g0010 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| MA_12056g0010 | No alias | alpha-class expansin | 0.06 | Archaeplastida | |
| MA_37884g0010 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| MA_40637g0020 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| MA_4979g0010 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| MA_51645g0010 | No alias | Expansin-A1 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| MA_7218g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_792493g0010 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| MA_86877g0010 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Mp3g03890.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| Mp3g06900.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| Mp3g09770.1 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| Mp8g18860.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| Pp3c13_20360V3.1 | No alias | expansin A9 | 0.02 | Archaeplastida | |
| Pp3c13_8440V3.1 | No alias | expansin A9 | 0.02 | Archaeplastida | |
| Pp3c24_15400V3.1 | No alias | expansin A15 | 0.02 | Archaeplastida | |
| Pp3c8_13470V3.1 | No alias | expansin A1 | 0.02 | Archaeplastida | |
| Smo143857 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.02 | Archaeplastida | |
| Smo179212 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.05 | Archaeplastida | |
| Smo409954 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.04 | Archaeplastida | |
| Smo78615 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | Archaeplastida | |
| Smo90332 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.02 | Archaeplastida | |
| Solyc03g115300.2.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Solyc03g115310.1.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Solyc03g115890.3.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Solyc05g052250.3.1 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| Solyc09g010860.4.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| Solyc09g018020.3.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Solyc10g084780.3.1 | No alias | alpha-class expansin | 0.06 | Archaeplastida | |
| Solyc12g089380.2.1 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| Zm00001e004714_P001 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Zm00001e007142_P001 | No alias | alpha-class expansin | 0.05 | Archaeplastida | |
| Zm00001e014220_P001 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Zm00001e014231_P001 | No alias | Expansin-A13 OS=Oryza sativa subsp. japonica... | 0.06 | Archaeplastida | |
| Zm00001e019433_P001 | No alias | alpha-class expansin | 0.11 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0005506 | iron ion binding | IEP | Neighborhood |
| CC | GO:0005618 | cell wall | IEP | Neighborhood |
| MF | GO:0008146 | sulfotransferase activity | IEP | Neighborhood |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Neighborhood |
| MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | Neighborhood |
| MF | GO:0009055 | electron transfer activity | IEP | Neighborhood |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Neighborhood |
| MF | GO:0016782 | transferase activity, transferring sulfur-containing groups | IEP | Neighborhood |
| MF | GO:0020037 | heme binding | IEP | Neighborhood |
| CC | GO:0030312 | external encapsulating structure | IEP | Neighborhood |
| MF | GO:0030599 | pectinesterase activity | IEP | Neighborhood |
| BP | GO:0042545 | cell wall modification | IEP | Neighborhood |
| BP | GO:0045229 | external encapsulating structure organization | IEP | Neighborhood |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Neighborhood |
| MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | Neighborhood |
| BP | GO:0071555 | cell wall organization | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR009009 | RlpA-like_DPBB | 39 | 107 |
| No external refs found! |