AMTR_s00110p00112890 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00110.71

Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor

Gene families : OG0003513 (Archaeplastida) Phylogenetic Tree(s): OG0003513_tree ,
OG_05_0002430 (LandPlants) Phylogenetic Tree(s): OG_05_0002430_tree ,
OG_06_0001223 (SeedPlants) Phylogenetic Tree(s): OG_06_0001223_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00110p00112890
Cluster	HCCA: Cluster_22

Target	Alias	Description	ECC score	Gene Family Method
AT1G70270	No alias	unknown protein; BEST Arabidopsis thaliana protein match...	0.03	Archaeplastida
Gb_30108	No alias	transcription factor (bHLH)	0.03	Archaeplastida
Gb_34725	No alias	transcription factor (bHLH)	0.03	Archaeplastida
MA_36564g0010	No alias	transcription factor (bHLH)	0.03	Archaeplastida
Solyc01g079270.1.1	No alias	transcription factor (bHLH)	0.04	Archaeplastida
Solyc06g009510.1.1	No alias	transcription factor (bHLH)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004180	carboxypeptidase activity	IEP	Neighborhood
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Neighborhood
MF	GO:0008238	exopeptidase activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0070008	serine-type exopeptidase activity	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!