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  5. AMTR_s00110p00151520

AMTR_s00110p00151520 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00110.127

Description : Probable methyltransferase PMT5 OS=Arabidopsis thaliana


Gene families : OG0004616 (Archaeplastida) Phylogenetic Tree(s): OG0004616_tree ,
OG_05_0003205 (LandPlants) Phylogenetic Tree(s): OG_05_0003205_tree ,
OG_06_0003550 (SeedPlants) Phylogenetic Tree(s): OG_06_0003550_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00110p00151520
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Gb_33593 No alias Probable pectin methyltransferase QUA2 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os02g51860.1 No alias Probable pectin methyltransferase QUA2 OS=Arabidopsis... 0.02 Archaeplastida
Smo426562 No alias Probable pectin methyltransferase QUA2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Zm00001e023857_P001 No alias Probable pectin methyltransferase QUA2 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008373 sialyltransferase activity IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004159 Put_SAM_MeTrfase 78 602
No external refs found!