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  5. AMTR_s00111p00023340

AMTR_s00111p00023340 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00111.6

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL15 component


Gene families : OG0002310 (Archaeplastida) Phylogenetic Tree(s): OG0002310_tree ,
OG_05_0002154 (LandPlants) Phylogenetic Tree(s): OG_05_0002154_tree ,
OG_06_0002413 (SeedPlants) Phylogenetic Tree(s): OG_06_0002413_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00111p00023340
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AT4G16720 No alias Ribosomal protein L23/L15e family protein 0.1 Archaeplastida
AT4G17390 No alias Ribosomal protein L23/L15e family protein 0.16 Archaeplastida
Cpa|evm.model.tig00000310.75 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 Archaeplastida
Cre02.g091100 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
GSVIVT01007404001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 Archaeplastida
GSVIVT01014039001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 Archaeplastida
GSVIVT01018183001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 Archaeplastida
Gb_32917 No alias component RPL15 of LSU proteome component 0.05 Archaeplastida
Gb_36986 No alias component RPL15 of LSU proteome component 0.1 Archaeplastida
LOC_Os03g40180.1 No alias component RPL15 of LSU proteome component 0.14 Archaeplastida
LOC_Os05g19370.1 No alias component RPL15 of LSU proteome component 0.15 Archaeplastida
MA_19619g0010 No alias component RPL15 of LSU proteome component 0.03 Archaeplastida
MA_29804g0010 No alias component RPL15 of LSU proteome component 0.12 Archaeplastida
Mp1g06500.1 No alias component RPL15 of LSU proteome component 0.19 Archaeplastida
Pp3c14_22920V3.1 No alias Ribosomal protein L23/L15e family protein 0.15 Archaeplastida
Pp3c17_22180V3.1 No alias Ribosomal protein L23/L15e family protein 0.09 Archaeplastida
Pp3c1_37420V3.1 No alias Ribosomal protein L23/L15e family protein 0.1 Archaeplastida
Pp3c20_2640V3.1 No alias Ribosomal protein L23/L15e family protein 0.1 Archaeplastida
Pp3c2_5780V3.1 No alias Ribosomal protein L23/L15e family protein 0.11 Archaeplastida
Pp3c8_22360V3.1 No alias Ribosomal protein L23/L15e family protein 0.12 Archaeplastida
Smo270259 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 Archaeplastida
Solyc04g008460.4.1 No alias component RPL15 of LSU proteome component 0.12 Archaeplastida
Solyc06g060400.3.1 No alias component RPL15 of LSU proteome component 0.21 Archaeplastida
Solyc06g064630.3.1 No alias component RPL15 of LSU proteome component 0.17 Archaeplastida
Zm00001e010380_P001 No alias component RPL15 of LSU proteome component 0.19 Archaeplastida
Zm00001e032897_P001 No alias component RPL15 of LSU proteome component 0.14 Archaeplastida
Zm00001e034995_P001 No alias component RPL15 of LSU proteome component 0.16 Archaeplastida
Zm00001e034996_P001 No alias component RPL15 of LSU proteome component 0.16 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006897 endocytosis IEP Neighborhood
BP GO:0006909 phagocytosis IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
BP GO:0098657 import into cell IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000439 Ribosomal_L15e 31 222
No external refs found!