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  5. AMTR_s00111p00054240

AMTR_s00111p00054240 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00111.26

Description : DnaJ protein homolog 2 OS=Allium porrum


Gene families : OG0001328 (Archaeplastida) Phylogenetic Tree(s): OG0001328_tree ,
OG_05_0001193 (LandPlants) Phylogenetic Tree(s): OG_05_0001193_tree ,
OG_06_0001469 (SeedPlants) Phylogenetic Tree(s): OG_06_0001469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00111p00054240
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01034612001 No alias DnaJ protein homolog OS=Cucumis sativus 0.04 Archaeplastida
LOC_Os02g43930.1 No alias co-chaperone (Hsp40) 0.03 Archaeplastida
LOC_Os03g44620.2 No alias co-chaperone (Hsp40) 0.1 Archaeplastida
Pp3c21_19830V3.1 No alias DNAJ homologue 2 0.02 Archaeplastida
Solyc05g055160.3.1 No alias co-chaperone (Hsp40) 0.06 Archaeplastida
Solyc11g006460.3.1 No alias co-chaperone (Hsp40) 0.08 Archaeplastida
Zm00001e005000_P002 No alias co-chaperone (Hsp40) 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEA Interproscan
MF GO:0031072 heat shock protein binding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004455 ketol-acid reductoisomerase activity IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0009081 branched-chain amino acid metabolic process IEP Neighborhood
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Neighborhood
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Neighborhood
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Neighborhood
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 14 71
IPR002939 DnaJ_C 219 279
IPR001305 HSP_DnaJ_Cys-rich_dom 147 213
No external refs found!