AMTR_s00111p00124110 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00111.97

Description : Enzyme classification.EC_4 lyases.EC_4.4 carbon-sulfur lyase

Gene families : OG0000541 (Archaeplastida) Phylogenetic Tree(s): OG0000541_tree ,
OG_05_0000356 (LandPlants) Phylogenetic Tree(s): OG_05_0000356_tree ,
OG_06_0000417 (SeedPlants) Phylogenetic Tree(s): OG_06_0000417_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00111p00124110
Cluster	HCCA: Cluster_83

Target	Alias	Description	ECC score	Gene Family Method	Actions
LOC_Os04g48850.1	No alias	1-aminocyclopropane-1-carboxylate (ACC) synthase	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	IEA	Interproscan
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030170	pyridoxal phosphate binding	IEA	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050662	coenzyme binding	None	Extended
MF	GO:0070279	vitamin B6 binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006304	DNA modification	IEP	Neighborhood
BP	GO:0006305	DNA alkylation	IEP	Neighborhood
BP	GO:0006306	DNA methylation	IEP	Neighborhood
BP	GO:0044728	DNA methylation or demethylation	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004839	Aminotransferase_I/II	73	184

External Links

No external refs found!