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  5. AMTR_s00111p00135880

AMTR_s00111p00135880 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00111.114

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor


Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0000426 (LandPlants) Phylogenetic Tree(s): OG_05_0000426_tree ,
OG_06_0000467 (SeedPlants) Phylogenetic Tree(s): OG_06_0000467_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00111p00135880
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
Pp3c15_23090V3.1 No alias myb-like transcription factor family protein 0.02 Archaeplastida
Pp3c4_5410V3.1 No alias myb-like transcription factor family protein 0.02 Archaeplastida
Solyc04g005100.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008198 ferrous iron binding IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 98 142
No external refs found!