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  5. AMTR_s00112p00047400

AMTR_s00112p00047400 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00112.11

Description : Endoglucanase 11 OS=Arabidopsis thaliana


Gene families : OG0000093 (Archaeplastida) Phylogenetic Tree(s): OG0000093_tree ,
OG_05_0000489 (LandPlants) Phylogenetic Tree(s): OG_05_0000489_tree ,
OG_06_0000356 (SeedPlants) Phylogenetic Tree(s): OG_06_0000356_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00112p00047400
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00247670 evm_27.TU.AmTr_v1... Endoglucanase 23 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
AT1G70710 CEL1, GH9B1, ATGH9B1 glycosyl hydrolase 9B1 0.02 Archaeplastida
AT2G44570 GH9B12, AtGH9B12 glycosyl hydrolase 9B12 0.02 Archaeplastida
GSVIVT01019523001 No alias Endoglucanase 6 OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_21389 No alias endo-1,4-beta-glucanase 0.03 Archaeplastida
Gb_21395 No alias endo-1,4-beta-glucanase 0.03 Archaeplastida
Gb_28546 No alias Endoglucanase 6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g50490.1 No alias Endoglucanase 7 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_140507g0010 No alias Endoglucanase 8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_480961g0010 No alias Endoglucanase 8 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_74652g0010 No alias Endoglucanase 8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_9211546g0010 No alias Endoglucanase 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp2g26250.1 No alias Endoglucanase 24 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Mp8g03880.1 No alias Endoglucanase OS=Phaseolus vulgaris (sp|p22503|gun_phavu : 521.0) 0.03 Archaeplastida
Mp8g17860.1 No alias Endoglucanase 3 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
Pp3c13_1470V3.1 No alias glycosyl hydrolase 9C2 0.02 Archaeplastida
Pp3c13_24600V3.1 No alias glycosyl hydrolase 9C2 0.03 Archaeplastida
Pp3c16_5450V3.1 No alias glycosyl hydrolase 9A1 0.02 Archaeplastida
Pp3c4_23640V3.1 No alias glycosyl hydrolase 9B7 0.03 Archaeplastida
Smo234652 No alias Endoglucanase 6 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc08g083210.3.1 No alias Endoglucanase 1 OS=Persea americana... 0.02 Archaeplastida
Zm00001e013277_P001 No alias Endoglucanase 18 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e013509_P001 No alias Endoglucanase 4 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e015739_P002 No alias Endoglucanase 6 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e026066_P002 No alias Endoglucanase 2 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e026190_P002 No alias Endoglucanase 3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e030964_P003 No alias Endoglucanase 17 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0006621 protein retention in ER lumen IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030337 DNA polymerase processivity factor activity IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
MF GO:0033897 ribonuclease T2 activity IEP Neighborhood
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
CC GO:0043626 PCNA complex IEP Neighborhood
CC GO:0044796 DNA polymerase processivity factor complex IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 36 498
No external refs found!