AMTR_s00113p00077540 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00113.16

Description : RNA biosynthesis.transcriptional activation.NAC transcription factor

Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000015 (LandPlants) Phylogenetic Tree(s): OG_05_0000015_tree ,
OG_06_0000168 (SeedPlants) Phylogenetic Tree(s): OG_06_0000168_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00113p00077540
Cluster	HCCA: Cluster_88

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00193150	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
AMTR_s00003p00252470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
AMTR_s00010p00266320	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
AMTR_s00025p00174590	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
AMTR_s00119p00045570	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00149p00068500	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AT1G12260	EMB2749,...	NAC 007	0.03	Archaeplastida
AT1G32510	NAC011, ANAC011	NAC domain containing protein 11	0.03	Archaeplastida
AT1G32770	ANAC012, NST3,...	NAC domain containing protein 12	0.14	Archaeplastida
AT1G33280	BRN1, ANAC015, NAC015	NAC domain containing protein 15	0.03	Archaeplastida
AT1G52890	ANAC019, NAC019	NAC domain containing protein 19	0.03	Archaeplastida
AT1G56010	anac021, NAC1, ANAC022	NAC domain containing protein 1	0.03	Archaeplastida
AT1G61110	NAC025, anac025	NAC domain containing protein 25	0.03	Archaeplastida
AT1G62700	VND5, ANAC026	Arabidopsis NAC domain containing protein 26	0.03	Archaeplastida
AT1G65910	anac028, NAC028	NAC domain containing protein 28	0.05	Archaeplastida
AT1G71930	ANAC030, VND7	vascular related NAC-domain protein 7	0.03	Archaeplastida
AT2G33480	NAC041, ANAC041	NAC domain containing protein 41	0.03	Archaeplastida
AT2G43000	NAC042, anac042	NAC domain containing protein 42	0.04	Archaeplastida
AT2G46770	NST1, ANAC043, EMB2301	NAC (No Apical Meristem) domain transcriptional...	0.14	Archaeplastida
AT3G12910	No alias	NAC (No Apical Meristem) domain transcriptional...	0.04	Archaeplastida
AT3G12977	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
AT3G15510	NARS1, NAC2,...	NAC domain containing protein 2	0.04	Archaeplastida
AT3G29035	ATNAC3, NAC3, ANAC059	NAC domain containing protein 3	0.03	Archaeplastida
AT3G61910	NST2, NAC066, ANAC066	NAC domain protein 66	0.17	Archaeplastida
AT4G10350	ANAC070, BRN2, NAC070	NAC domain containing protein 70	0.04	Archaeplastida
AT4G28530	anac074, NAC074	NAC domain containing protein 74	0.03	Archaeplastida
AT4G36160	VND2, NAC076, ANAC076	NAC domain containing protein 76	0.03	Archaeplastida
AT5G04400	NAC077, anac077	NAC domain containing protein 77	0.03	Archaeplastida
AT5G07680	ANAC080,...	NAC domain containing protein 80	0.03	Archaeplastida
AT5G13180	VNI2, NAC083, ANAC083	NAC domain containing protein 83	0.04	Archaeplastida
AT5G24590	ANAC091, TIP	No description available	0.03	Archaeplastida
AT5G46590	anac096, NAC096	NAC domain containing protein 96	0.03	Archaeplastida
GSVIVT01001264001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.07	Archaeplastida
GSVIVT01008291001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
GSVIVT01008839001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
GSVIVT01013419001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01018623001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
GSVIVT01018809001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.15	Archaeplastida
GSVIVT01019670001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.13	Archaeplastida
GSVIVT01020384001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
GSVIVT01020834001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01027431001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.07	Archaeplastida
GSVIVT01029392001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
GSVIVT01035554001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
Gb_01126	No alias	transcription factor (NAC)	0.04	Archaeplastida
Gb_02849	No alias	transcription factor (NAC)	0.03	Archaeplastida
Gb_05670	No alias	transcription factor (NAC)	0.03	Archaeplastida
Gb_27819	No alias	transcription factor (KNOX). transcription factor (NAC)	0.04	Archaeplastida
Gb_35048	No alias	transcription factor (NAC)	0.03	Archaeplastida
Gb_41026	No alias	transcription factor (NAC)	0.05	Archaeplastida
Gb_41540	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os01g60020.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os01g66120.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os02g15340.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os02g56600.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os03g21030.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os03g42630.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
LOC_Os03g60080.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os04g38720.1	No alias	transcription factor (NAC)	0.06	Archaeplastida
LOC_Os04g43560.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os04g45340.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
LOC_Os04g59470.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os05g34600.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os05g34830.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os06g01230.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os06g33940.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os06g51070.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os07g37920.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os07g48450.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os07g48550.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os08g02160.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os08g02300.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os09g32260.2	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os11g08210.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_103386g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_112054g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_137415g0010	No alias	transcription factor (NAC)	0.07	Archaeplastida
MA_138461g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_183543g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_18939g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_21732g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_23113g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_33912g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_5017g0010	No alias	transcription factor (NAC)	0.04	Archaeplastida
MA_5115g0010	No alias	transcription factor (NAC)	0.04	Archaeplastida
MA_64687g0010	No alias	transcription factor (NAC)	0.04	Archaeplastida
MA_6777g0010	No alias	No annotation	0.06	Archaeplastida
MA_73369g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_80232g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_86256g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_8980g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_95225g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
Mp4g11910.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Mp6g02620.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Mp6g02670.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Pp3c13_10800V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Archaeplastida
Pp3c16_23260V3.1	No alias	NAC domain containing protein 35	0.05	Archaeplastida
Pp3c4_29470V3.1	No alias	NAC 007	0.03	Archaeplastida
Pp3c5_570V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.05	Archaeplastida
Pp3c5_630V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
Pp3c6_27690V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
Smo105213	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
Solyc02g036430.2.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc02g069960.4.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc02g084350.3.1	No alias	transcription factor (NAC)	0.14	Archaeplastida
Solyc02g087920.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc02g088180.3.1	No alias	transcription factor (NAC)	0.06	Archaeplastida
Solyc03g097650.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc04g005610.3.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
Solyc05g007550.3.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc06g034340.3.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
Solyc06g065410.3.1	No alias	transcription factor (NAC)	0.06	Archaeplastida
Solyc06g073050.2.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc07g066330.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc08g008660.4.1	No alias	transcription factor (NAC)	0.14	Archaeplastida
Solyc08g077110.4.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc08g079120.3.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc09g025310.4.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc10g005010.4.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
Solyc10g006880.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc10g055760.2.1	No alias	transcription factor (NAC)	0.06	Archaeplastida
Solyc11g018660.2.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc12g017400.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc12g036480.2.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e000149_P001	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e003559_P003	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e004141_P001	No alias	transcription factor (NAC)	0.07	Archaeplastida
Zm00001e005094_P001	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e005863_P002	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e006136_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e006914_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e007411_P001	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e007905_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e010094_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e011934_P001	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e012429_P001	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e012982_P001	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e014924_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e015816_P003	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e019046_P002	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e019473_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e022155_P001	No alias	transcription factor (NAC)	0.11	Archaeplastida
Zm00001e022817_P003	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e023019_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e024028_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e024549_P002	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e029116_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e029194_P001	No alias	transcription factor (NAC)	0.12	Archaeplastida
Zm00001e029913_P001	No alias	transcription factor (NAC)	0.09	Archaeplastida
Zm00001e031703_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e034574_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e034913_P002	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e034914_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e035277_P002	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e035884_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e036590_P001	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e036720_P002	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e037088_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e039246_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e039557_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e041236_P002	No alias	transcription factor (NAC)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000156	phosphorelay response regulator activity	IEP	Neighborhood
BP	GO:0000160	phosphorelay signal transduction system	IEP	Neighborhood
BP	GO:0000271	polysaccharide biosynthetic process	IEP	Neighborhood
MF	GO:0005507	copper ion binding	IEP	Neighborhood
BP	GO:0005976	polysaccharide metabolic process	IEP	Neighborhood
BP	GO:0006073	cellular glucan metabolic process	IEP	Neighborhood
BP	GO:0008033	tRNA processing	IEP	Neighborhood
MF	GO:0008171	O-methyltransferase activity	IEP	Neighborhood
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Neighborhood
BP	GO:0009250	glucan biosynthetic process	IEP	Neighborhood
MF	GO:0015018	galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity	IEP	Neighborhood
MF	GO:0015020	glucuronosyltransferase activity	IEP	Neighborhood
MF	GO:0015298	solute:cation antiporter activity	IEP	Neighborhood
MF	GO:0015299	solute:proton antiporter activity	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
BP	GO:0016051	carbohydrate biosynthetic process	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Neighborhood
MF	GO:0016759	cellulose synthase activity	IEP	Neighborhood
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	Neighborhood
BP	GO:0030243	cellulose metabolic process	IEP	Neighborhood
BP	GO:0030244	cellulose biosynthetic process	IEP	Neighborhood
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	Neighborhood
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	Neighborhood
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
BP	GO:0044042	glucan metabolic process	IEP	Neighborhood
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Neighborhood
MF	GO:0046527	glucosyltransferase activity	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
BP	GO:0051273	beta-glucan metabolic process	IEP	Neighborhood
BP	GO:0051274	beta-glucan biosynthetic process	IEP	Neighborhood
MF	GO:0060089	molecular transducer activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	153	281

External Links

No external refs found!

AMTR_s00113p00077540 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation