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  5. AMTR_s00114p00018640

AMTR_s00114p00018640 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00114.4

Description : Protein biosynthesis.translation initiation.mRNA loading.eIF4B mRNA unwinding factor


Gene families : OG0001866 (Archaeplastida) Phylogenetic Tree(s): OG0001866_tree ,
OG_05_0001421 (LandPlants) Phylogenetic Tree(s): OG_05_0001421_tree ,
OG_06_0001509 (SeedPlants) Phylogenetic Tree(s): OG_06_0001509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00114p00018640
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AT4G38710 No alias glycine-rich protein 0.02 Archaeplastida
LOC_Os04g40400.1 No alias mRNA unwinding factor (eIF4B) 0.02 Archaeplastida
MA_10435999g0020 No alias mRNA unwinding factor (eIF4B) 0.02 Archaeplastida
MA_20268g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c3_35650V3.1 No alias eukaryotic translation initiation factor 4B1 0.03 Archaeplastida
Solyc05g013700.4.1 No alias mRNA unwinding factor (eIF4B) 0.05 Archaeplastida
Zm00001e041080_P001 No alias mRNA unwinding factor (eIF4B) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004619 phosphoglycerate mutase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006007 glucose catabolic process IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Neighborhood
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0019320 hexose catabolic process IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046365 monosaccharide catabolic process IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Neighborhood
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR010433 EIF-4B_pln 6 238
No external refs found!