AMTR_s00114p00070400 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00114.23

Description : CEN-like protein 2 OS=Nicotiana tabacum


Gene families : OG0000296 (Archaeplastida) Phylogenetic Tree(s): OG0000296_tree ,
OG_05_0000209 (LandPlants) Phylogenetic Tree(s): OG_05_0000209_tree ,
OG_06_0000451 (SeedPlants) Phylogenetic Tree(s): OG_06_0000451_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00114p00070400
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00045830 evm_27.TU.AmTr_v1... Protein HEADING DATE 3A OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
MA_14586g0010 No alias PEB protein-dependent signalling regulatory protein (PEBP) 0.02 Archaeplastida
Solyc05g055660.3.1 No alias PEB protein-dependent signalling regulatory protein (PEBP) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
MF GO:0004970 ionotropic glutamate receptor activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005231 excitatory extracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005234 extracellularly glutamate-gated ion channel activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0008066 glutamate receptor activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022824 transmitter-gated ion channel activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022835 transmitter-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
CC GO:0030288 outer membrane-bounded periplasmic space IEP Neighborhood
MF GO:0030594 neurotransmitter receptor activity IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
CC GO:0042597 periplasmic space IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
InterPro domains Description Start Stop
IPR008914 PEBP 26 162
No external refs found!