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  5. AMTR_s00114p00093910

AMTR_s00114p00093910 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00114.36

Description : Dirigent protein 21 OS=Arabidopsis thaliana


Gene families : OG0000064 (Archaeplastida) Phylogenetic Tree(s): OG0000064_tree ,
OG_05_0000024 (LandPlants) Phylogenetic Tree(s): OG_05_0000024_tree ,
OG_06_0000028 (SeedPlants) Phylogenetic Tree(s): OG_06_0000028_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00114p00093910
Cluster HCCA: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00177760 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00041p00187080 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00041p00187220 evm_27.TU.AmTr_v1... Dirigent protein 21 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00995p00008650 evm_27.TU.AmTr_v1... Dirigent protein 21 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s01623p00005280 evm_27.TU.AmTr_v1... Dirigent protein 21 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_39275 No alias Dirigent protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_39276 No alias Dirigent protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os07g42520.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e011579_P001 No alias Dirigent protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
InterPro domains Description Start Stop
IPR004265 Dirigent 83 228
No external refs found!